Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 MIR3157-201ENST00000578688 85 ntBASIC8.35□□□□□ -1.07
PDS5AQ29RF7 AL035410.2-201ENST00000604963 864 ntBASIC8.35□□□□□ -1.07
PDS5AQ29RF7 MIR6813-201ENST00000621638 56 ntBASIC8.35□□□□□ -1.07
PDS5AQ29RF7 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 MKI67P1-201ENST00000604297 1460 ntBASIC8.35□□□□□ -1.07
PDS5AQ29RF7 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 LRRC37A12P-201ENST00000454917 1801 ntBASIC8.35□□□□□ -1.07
PDS5AQ29RF7 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 HCG18-244ENST00000602516 2890 ntBASIC8.35□□□□□ -1.07
PDS5AQ29RF7 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 TTC3P1-201ENST00000399586 6081 ntBASIC8.35□□□□□ -1.07
PDS5AQ29RF7 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 AC005614.1-201ENST00000598952 3653 ntBASIC8.35□□□□□ -1.07
PDS5AQ29RF7 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 HNRNPH1P2-201ENST00000396845 1210 ntBASIC8.34□□□□□ -1.07
PDS5AQ29RF7 FDPSP5-201ENST00000399474 1057 ntBASIC8.34□□□□□ -1.07
PDS5AQ29RF7 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 AL773545.3-201ENST00000414297 706 ntBASIC8.34□□□□□ -1.07
PDS5AQ29RF7 VDAC1P2-201ENST00000423609 850 ntBASIC8.34□□□□□ -1.07
PDS5AQ29RF7 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 RN7SL393P-201ENST00000463588 296 ntBASIC8.34□□□□□ -1.07
PDS5AQ29RF7 AC099340.1-201ENST00000475247 599 ntBASIC8.34□□□□□ -1.07
PDS5AQ29RF7 AC092349.1-201ENST00000504903 310 ntBASIC8.34□□□□□ -1.07
PDS5AQ29RF7 SSX8-201ENST00000506270 579 ntBASIC8.34□□□□□ -1.07
PDS5AQ29RF7 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 AC020914.7-201ENST00000594477 545 ntBASIC8.34□□□□□ -1.07
PDS5AQ29RF7 AC036176.3-201ENST00000602456 418 ntBASIC8.34□□□□□ -1.07
PDS5AQ29RF7 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PDS5AQ29RF7 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 ERMN-202ENST00000409216 746 ntTSL 4 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 RPS4XP23-201ENST00000487801 237 ntBASIC8.33□□□□□ -1.08
PDS5AQ29RF7 AK6-203ENST00000502819 743 ntTSL 5 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 OR5BK1P-201ENST00000550421 823 ntBASIC8.33□□□□□ -1.08
PDS5AQ29RF7 GNG2-203ENST00000553432 577 ntTSL 4 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 AC004908.1-201ENST00000606572 541 ntBASIC8.33□□□□□ -1.08
PDS5AQ29RF7 AC015819.1-201ENST00000613588 663 ntBASIC8.33□□□□□ -1.08
PDS5AQ29RF7 Six3os1_1.1-201ENST00000620900 87 ntBASIC8.33□□□□□ -1.08
PDS5AQ29RF7 AC027348.2-201ENST00000624375 642 ntBASIC8.33□□□□□ -1.08
PDS5AQ29RF7 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 AC104837.1-201ENST00000444644 1587 ntBASIC8.33□□□□□ -1.08
PDS5AQ29RF7 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
PDS5AQ29RF7 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
PDS5AQ29RF7 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC8.32□□□□□ -1.08
PDS5AQ29RF7 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC8.32□□□□□ -1.08
PDS5AQ29RF7 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PDS5AQ29RF7 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8.32□□□□□ -1.08
PDS5AQ29RF7 MEF2AP1-201ENST00000454867 863 ntBASIC8.32□□□□□ -1.08
PDS5AQ29RF7 RN7SL70P-201ENST00000478322 302 ntBASIC8.32□□□□□ -1.08
PDS5AQ29RF7 AC026774.2-201ENST00000513990 1098 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms