Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC6.66□□□□□ -1.34
CD40P25942 AC117383.2-201ENST00000514722 322 ntBASIC6.66□□□□□ -1.34
CD40P25942 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.66□□□□□ -1.34
CD40P25942 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.66□□□□□ -1.34
CD40P25942 AP000916.1-201ENST00000533869 835 ntBASIC6.66□□□□□ -1.34
CD40P25942 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC6.66□□□□□ -1.34
CD40P25942 AL121839.1-201ENST00000556233 1185 ntBASIC6.66□□□□□ -1.34
CD40P25942 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.66□□□□□ -1.34
CD40P25942 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC6.66□□□□□ -1.34
CD40P25942 AL359715.3-201ENST00000569267 2123 ntBASIC6.66□□□□□ -1.34
CD40P25942 PRELID3BP3-201ENST00000584963 545 ntBASIC6.66□□□□□ -1.34
CD40P25942 AC114878.2-201ENST00000604863 1251 ntBASIC6.66□□□□□ -1.34
CD40P25942 AC093673.2-201ENST00000609674 331 ntBASIC6.66□□□□□ -1.34
CD40P25942 AC069499.2-201ENST00000610665 382 ntBASIC6.66□□□□□ -1.34
CD40P25942 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
CD40P25942 TUBBP10-201ENST00000427668 1301 ntBASIC6.66□□□□□ -1.34
CD40P25942 AC100810.3-201ENST00000633189 2240 ntBASIC6.66□□□□□ -1.34
CD40P25942 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC6.66□□□□□ -1.34
CD40P25942 AC078795.1-201ENST00000602342 3143 ntBASIC6.66□□□□□ -1.34
CD40P25942 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
CD40P25942 AP002833.3-201ENST00000625075 2265 ntBASIC6.66□□□□□ -1.34
CD40P25942 XRCC6P2-201ENST00000457831 1822 ntBASIC6.66□□□□□ -1.34
CD40P25942 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
CD40P25942 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CD40P25942 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CD40P25942 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.66□□□□□ -1.34
CD40P25942 EEF1A1P4-201ENST00000359165 1405 ntBASIC6.66□□□□□ -1.34
CD40P25942 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC6.66□□□□□ -1.34
CD40P25942 LINC00294-201ENST00000631190 3306 ntBASIC6.66□□□□□ -1.34
CD40P25942 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CD40P25942 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
CD40P25942 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC6.65□□□□□ -1.34
CD40P25942 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.65□□□□□ -1.34
CD40P25942 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CD40P25942 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CD40P25942 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CD40P25942 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CD40P25942 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC6.65□□□□□ -1.34
CD40P25942 AC012360.3-201ENST00000610036 3449 ntBASIC6.65□□□□□ -1.34
CD40P25942 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
CD40P25942 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CD40P25942 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CD40P25942 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC6.65□□□□□ -1.34
CD40P25942 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
CD40P25942 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CD40P25942 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CD40P25942 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CD40P25942 AC010132.2-201ENST00000295493 1043 ntBASIC6.65□□□□□ -1.34
CD40P25942 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CD40P25942 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.65□□□□□ -1.34
CD40P25942 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CD40P25942 AL139327.1-201ENST00000382988 348 ntBASIC6.65□□□□□ -1.34
CD40P25942 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CD40P25942 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CD40P25942 RPL7-203ENST00000396466 762 ntTSL 3 BASIC6.65□□□□□ -1.34
CD40P25942 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC6.65□□□□□ -1.34
CD40P25942 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.65□□□□□ -1.34
CD40P25942 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.65□□□□□ -1.34
CD40P25942 AL356968.2-201ENST00000412769 1257 ntBASIC6.65□□□□□ -1.34
CD40P25942 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.65□□□□□ -1.34
CD40P25942 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.65□□□□□ -1.34
CD40P25942 MTCO2P21-201ENST00000419780 677 ntBASIC6.65□□□□□ -1.34
CD40P25942 AC093107.1-201ENST00000422772 609 ntBASIC6.65□□□□□ -1.34
CD40P25942 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CD40P25942 AC093422.3-201ENST00000428506 305 ntBASIC6.65□□□□□ -1.34
CD40P25942 RPL12P28-201ENST00000430852 489 ntBASIC6.65□□□□□ -1.34
CD40P25942 AC097527.1-201ENST00000437031 530 ntBASIC6.65□□□□□ -1.34
CD40P25942 ARF4P4-201ENST00000439608 520 ntBASIC6.65□□□□□ -1.34
CD40P25942 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CD40P25942 AL451063.1-201ENST00000450164 1133 ntBASIC6.65□□□□□ -1.34
CD40P25942 LRRC37A14P-201ENST00000452297 462 ntBASIC6.65□□□□□ -1.34
CD40P25942 AC093166.2-201ENST00000455969 1017 ntBASIC6.65□□□□□ -1.34
CD40P25942 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.65□□□□□ -1.34
CD40P25942 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.65□□□□□ -1.34
CD40P25942 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC6.65□□□□□ -1.34
CD40P25942 RN7SL58P-201ENST00000473445 294 ntBASIC6.65□□□□□ -1.34
CD40P25942 AC108688.1-201ENST00000485817 713 ntBASIC6.65□□□□□ -1.34
CD40P25942 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.65□□□□□ -1.34
CD40P25942 FTH1P23-201ENST00000492727 550 ntBASIC6.65□□□□□ -1.34
CD40P25942 RN7SL869P-201ENST00000497032 300 ntBASIC6.65□□□□□ -1.34
CD40P25942 AL445187.1-201ENST00000502685 260 ntBASIC6.65□□□□□ -1.34
CD40P25942 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.65□□□□□ -1.34
CD40P25942 AC108103.1-201ENST00000511286 446 ntBASIC6.65□□□□□ -1.34
CD40P25942 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC6.65□□□□□ -1.34
CD40P25942 AC133963.2-201ENST00000513686 578 ntBASIC6.65□□□□□ -1.34
CD40P25942 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.65□□□□□ -1.34
CD40P25942 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.65□□□□□ -1.34
CD40P25942 AP000435.1-201ENST00000528539 496 ntBASIC6.65□□□□□ -1.34
CD40P25942 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.65□□□□□ -1.34
CD40P25942 AP004833.3-201ENST00000531893 322 ntBASIC6.65□□□□□ -1.34
CD40P25942 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.65□□□□□ -1.34
CD40P25942 DNM1P31-201ENST00000564149 696 ntBASIC6.65□□□□□ -1.34
CD40P25942 AC243312.1-201ENST00000570582 275 ntBASIC6.65□□□□□ -1.34
CD40P25942 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC6.65□□□□□ -1.34
CD40P25942 AP001357.1-201ENST00000586304 1053 ntBASIC6.65□□□□□ -1.34
CD40P25942 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.65□□□□□ -1.34
CD40P25942 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.65□□□□□ -1.34
CD40P25942 AC008751.2-201ENST00000597885 980 ntBASIC6.65□□□□□ -1.34
CD40P25942 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.65□□□□□ -1.34
CD40P25942 BMS1P7-201ENST00000602440 1052 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms