Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC8.44□□□□□ -1.06
CHGBP05060 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC8.44□□□□□ -1.06
CHGBP05060 SIGLEC31P-201ENST00000594237 551 ntBASIC8.44□□□□□ -1.06
CHGBP05060 AL035410.2-201ENST00000604963 864 ntBASIC8.44□□□□□ -1.06
CHGBP05060 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC8.44□□□□□ -1.06
CHGBP05060 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC8.44□□□□□ -1.06
CHGBP05060 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC8.44□□□□□ -1.06
CHGBP05060 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC8.44□□□□□ -1.06
CHGBP05060 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CHGBP05060 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHGBP05060 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHGBP05060 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC8.44□□□□□ -1.06
CHGBP05060 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHGBP05060 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
CHGBP05060 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.44□□□□□ -1.06
CHGBP05060 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
CHGBP05060 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC8.44□□□□□ -1.06
CHGBP05060 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC8.44□□□□□ -1.06
CHGBP05060 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
CHGBP05060 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHGBP05060 OR5AQ1P-202ENST00000641257 1534 ntBASIC8.44□□□□□ -1.06
CHGBP05060 OR5AQ1P-203ENST00000641818 1529 ntBASIC8.44□□□□□ -1.06
CHGBP05060 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHGBP05060 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC8.43□□□□□ -1.06
CHGBP05060 VN2R1P-201ENST00000449668 1743 ntBASIC8.43□□□□□ -1.06
CHGBP05060 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHGBP05060 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHGBP05060 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHGBP05060 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CHGBP05060 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CHGBP05060 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
CHGBP05060 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
CHGBP05060 RNA5SP176-201ENST00000390956 110 ntBASIC8.43□□□□□ -1.06
CHGBP05060 RBBP4P4-201ENST00000398588 1289 ntBASIC8.43□□□□□ -1.06
CHGBP05060 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHGBP05060 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC8.43□□□□□ -1.06
CHGBP05060 RPL6P21-201ENST00000418672 846 ntBASIC8.43□□□□□ -1.06
CHGBP05060 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC8.43□□□□□ -1.06
CHGBP05060 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC8.43□□□□□ -1.06
CHGBP05060 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC8.43□□□□□ -1.06
CHGBP05060 HMGN1P32-201ENST00000441744 256 ntBASIC8.43□□□□□ -1.06
CHGBP05060 AL356133.1-201ENST00000444762 372 ntBASIC8.43□□□□□ -1.06
CHGBP05060 RPL7AP71-201ENST00000451120 739 ntBASIC8.43□□□□□ -1.06
CHGBP05060 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC8.43□□□□□ -1.06
CHGBP05060 RN7SL655P-201ENST00000486087 298 ntBASIC8.43□□□□□ -1.06
CHGBP05060 RPL22-208ENST00000497965 786 ntTSL 2 BASIC8.43□□□□□ -1.06
CHGBP05060 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC8.43□□□□□ -1.06
CHGBP05060 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC8.43□□□□□ -1.06
CHGBP05060 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
CHGBP05060 CARSP2-201ENST00000520688 277 ntBASIC8.43□□□□□ -1.06
CHGBP05060 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC8.43□□□□□ -1.06
CHGBP05060 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC8.43□□□□□ -1.06
CHGBP05060 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC8.43□□□□□ -1.06
CHGBP05060 RPAP2P1-201ENST00000603626 1168 ntBASIC8.43□□□□□ -1.06
CHGBP05060 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC8.43□□□□□ -1.06
CHGBP05060 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC8.43□□□□□ -1.06
CHGBP05060 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CHGBP05060 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.43□□□□□ -1.06
CHGBP05060 ATP5BP1-201ENST00000411980 1574 ntBASIC8.43□□□□□ -1.06
CHGBP05060 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC8.43□□□□□ -1.06
CHGBP05060 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.43□□□□□ -1.06
CHGBP05060 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHGBP05060 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
CHGBP05060 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
CHGBP05060 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHGBP05060 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHGBP05060 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHGBP05060 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHGBP05060 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHGBP05060 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHGBP05060 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHGBP05060 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHGBP05060 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CHGBP05060 RNA5SP172-201ENST00000365061 118 ntBASIC8.42□□□□□ -1.06
CHGBP05060 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHGBP05060 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC8.42□□□□□ -1.06
CHGBP05060 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC8.42□□□□□ -1.06
CHGBP05060 AC091492.1-201ENST00000419844 272 ntBASIC8.42□□□□□ -1.06
CHGBP05060 UQCRHP1-204ENST00000424609 274 ntBASIC8.42□□□□□ -1.06
CHGBP05060 SNX19-202ENST00000426933 888 ntTSL 2 BASIC8.42□□□□□ -1.06
CHGBP05060 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC8.42□□□□□ -1.06
CHGBP05060 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC8.42□□□□□ -1.06
CHGBP05060 RBMY2BP-202ENST00000451071 1156 ntBASIC8.42□□□□□ -1.06
CHGBP05060 SUMO2P10-201ENST00000452006 288 ntBASIC8.42□□□□□ -1.06
CHGBP05060 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC8.42□□□□□ -1.06
CHGBP05060 AC135721.2-201ENST00000464237 300 ntBASIC8.42□□□□□ -1.06
CHGBP05060 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CHGBP05060 RN7SL259P-201ENST00000478499 253 ntBASIC8.42□□□□□ -1.06
CHGBP05060 PPP1R2P6-201ENST00000478565 588 ntBASIC8.42□□□□□ -1.06
CHGBP05060 RN7SL379P-201ENST00000479912 293 ntBASIC8.42□□□□□ -1.06
CHGBP05060 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.42□□□□□ -1.06
CHGBP05060 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC8.42□□□□□ -1.06
CHGBP05060 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC8.42□□□□□ -1.06
CHGBP05060 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC8.42□□□□□ -1.06
CHGBP05060 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC8.42□□□□□ -1.06
CHGBP05060 SCARNA11.1-201ENST00000516918 132 ntBASIC8.42□□□□□ -1.06
CHGBP05060 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC8.42□□□□□ -1.06
CHGBP05060 RBMS2P1-201ENST00000525031 1226 ntBASIC8.42□□□□□ -1.06
CHGBP05060 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC8.42□□□□□ -1.06
CHGBP05060 OR4A21P-201ENST00000532759 944 ntBASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms