Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX3Q99909 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.13□□□□□ -1.43
SSX3Q99909 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
SSX3Q99909 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
SSX3Q99909 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX3Q99909 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.13□□□□□ -1.43
SSX3Q99909 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
SSX3Q99909 AC022306.1-201ENST00000560489 1562 ntBASIC6.13□□□□□ -1.43
SSX3Q99909 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SSX3Q99909 AP003486.1-201ENST00000525716 3994 ntBASIC6.13□□□□□ -1.43
SSX3Q99909 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
SSX3Q99909 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX3Q99909 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
SSX3Q99909 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SSX3Q99909 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSX3Q99909 AL137058.3-201ENST00000624531 3099 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SSX3Q99909 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSX3Q99909 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.12□□□□□ -1.43
SSX3Q99909 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX3Q99909 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSX3Q99909 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.12□□□□□ -1.43
SSX3Q99909 U3.31-201ENST00000408113 216 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 AC023141.10-201ENST00000415634 200 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 VEZF1P1-201ENST00000423931 1541 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 RNF11P2-201ENST00000427702 440 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC6.12□□□□□ -1.43
SSX3Q99909 BX119917.1-201ENST00000432517 502 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 AC245047.1-201ENST00000433276 873 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 MORF4L1P5-201ENST00000433352 961 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 AL954705.1-201ENST00000435277 559 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC6.12□□□□□ -1.43
SSX3Q99909 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX3Q99909 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX3Q99909 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSX3Q99909 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSX3Q99909 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSX3Q99909 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.12□□□□□ -1.43
SSX3Q99909 PSMC1P7-201ENST00000495689 1315 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 RN7SL182P-201ENST00000496499 300 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 RPS26P24-201ENST00000497656 331 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 FTH1P8-201ENST00000498161 514 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 SUMO2P17-201ENST00000504438 285 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 AC112184.1-201ENST00000505179 312 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX3Q99909 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SSX3Q99909 FOLH1B-202ENST00000529567 2145 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX3Q99909 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.12□□□□□ -1.43
SSX3Q99909 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
SSX3Q99909 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX3Q99909 AC044860.3-201ENST00000559957 368 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
SSX3Q99909 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC6.12□□□□□ -1.43
SSX3Q99909 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX3Q99909 RPS28P1-201ENST00000604589 187 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 AL096855.2-201ENST00000605785 369 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 AL513218.1-201ENST00000606527 391 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 AC135050.6-202ENST00000613584 392 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 AC241377.1-201ENST00000619797 406 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 AC007204.1-201ENST00000621794 555 ntBASIC6.12□□□□□ -1.43
SSX3Q99909 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.12□□□□□ -1.43
SSX3Q99909 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.12□□□□□ -1.43
SSX3Q99909 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
SSX3Q99909 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.12□□□□□ -1.43
SSX3Q99909 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX3Q99909 TET1P1-201ENST00000426627 2301 ntBASIC6.11□□□□□ -1.43
SSX3Q99909 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX3Q99909 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.11□□□□□ -1.43
SSX3Q99909 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.11□□□□□ -1.43
SSX3Q99909 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX3Q99909 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SSX3Q99909 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.11□□□□□ -1.43
SSX3Q99909 AL606490.2-201ENST00000457562 1330 ntBASIC6.11□□□□□ -1.43
SSX3Q99909 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SSX3Q99909 PTMAP8-201ENST00000397729 342 ntBASIC6.11□□□□□ -1.43
SSX3Q99909 RPSAP44-201ENST00000406712 884 ntBASIC6.11□□□□□ -1.43
SSX3Q99909 RPL5P28-201ENST00000418634 693 ntBASIC6.11□□□□□ -1.43
SSX3Q99909 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.11□□□□□ -1.43
SSX3Q99909 PPIL1P1-201ENST00000423936 499 ntBASIC6.11□□□□□ -1.43
SSX3Q99909 SNX18P14-201ENST00000429308 574 ntBASIC6.11□□□□□ -1.43
SSX3Q99909 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC6.11□□□□□ -1.43
SSX3Q99909 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX3Q99909 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC6.11□□□□□ -1.43
SSX3Q99909 AC092421.1-201ENST00000448148 418 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms