Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
AP1S3Q96PC3 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 RNA5SP79-201ENST00000365193 109 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 NHP2P2-201ENST00000396362 460 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AL109918.1-202ENST00000406724 436 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 YBX1P8-201ENST00000421881 943 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 DUTP4-201ENST00000424782 475 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 SNX18P3-201ENST00000424993 835 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AC146944.2-202ENST00000425529 658 ntTSL 3 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 PTPN20-221ENST00000509599 945 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 PTPN20-223ENST00000509900 693 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 OR7E83P-201ENST00000511021 970 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 PTPN20-228ENST00000513266 818 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AC073581.1-201ENST00000519036 575 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AC012574.1-201ENST00000523874 252 ntTSL 5 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 OR7E154P-201ENST00000525174 932 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 CRYAB-215ENST00000533971 981 ntTSL 2 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 ULK4P3-201ENST00000563895 440 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 ULK4P1-202ENST00000565174 503 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AC018737.1-201ENST00000603900 204 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AC008626.1-201ENST00000604384 255 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 CUX2P1-201ENST00000606426 298 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AC103974.2-201ENST00000611319 778 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AC009120.7-201ENST00000623452 780 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 MAPK10-287ENST00000641217 3037 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AL035563.1-201ENST00000609087 1539 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 AL357556.1-201ENST00000421884 1388 ntBASIC5.27□□□□□ -1.57
AP1S3Q96PC3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
AP1S3Q96PC3 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 UGT2B27P-201ENST00000505092 1620 ntBASIC5.26□□□□□ -1.57
AP1S3Q96PC3 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 MED6-212ENST00000615788 1700 ntTSL 5 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 HNRNPH1P2-201ENST00000396845 1210 ntBASIC5.26□□□□□ -1.57
AP1S3Q96PC3 KRT18P52-201ENST00000404956 846 ntBASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 CDH13-203ENST00000431540 831 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AC023590.1-203ENST00000449065 411 ntTSL 3 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 PPP1R11P1-201ENST00000486095 376 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms