Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 AC127070.3-201ENST00000503695 3263 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 MIR498-201ENST00000385134 124 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 MIR301B-201ENST00000390813 78 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 AC231533.2-201ENST00000419045 978 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 ELOBP4-201ENST00000423418 296 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 CR391992.1-201ENST00000438601 394 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 RPL24P8-201ENST00000446071 474 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 CDC42P2-201ENST00000448566 569 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 AL049869.4-201ENST00000555669 178 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 MIR4786-201ENST00000583954 80 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 AL390058.1-201ENST00000603834 629 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 HNRNPA1P67-201ENST00000604027 926 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 AC008385.1-201ENST00000604421 355 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 AC243830.2-201ENST00000618067 630 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 AP000550.3-201ENST00000637734 379 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 AP000842.4-201ENST00000638781 748 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 SOCS5P5-201ENST00000402732 1586 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 TUBBP10-201ENST00000427668 1301 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
VMP1Q96GC9 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VMP1Q96GC9 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VMP1Q96GC9 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
VMP1Q96GC9 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VMP1Q96GC9 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 RN7SKP63-201ENST00000363187 301 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 SNORA73B-201ENST00000363217 204 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 RNA5SP260-201ENST00000363849 111 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VMP1Q96GC9 SSX6-201ENST00000376932 562 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 RN7SKP131-201ENST00000410698 301 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 AC020983.1-201ENST00000417063 543 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VMP1Q96GC9 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VMP1Q96GC9 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VMP1Q96GC9 FECHP1-201ENST00000431896 1214 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 GAPDHP75-201ENST00000433910 943 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 AL451074.4-201ENST00000447545 470 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 AC114755.1-201ENST00000453101 868 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 TAAR3P-201ENST00000466706 1078 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 AC018475.1-201ENST00000478358 465 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 TAAR3P-202ENST00000481759 1025 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 CEACAMP3-202ENST00000483806 638 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 AC008799.2-201ENST00000484429 647 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VMP1Q96GC9 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
VMP1Q96GC9 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VMP1Q96GC9 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms