Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 CTH-201ENST00000346806 1196 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 RPS3AP26-201ENST00000398259 784 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AL354794.2-201ENST00000424795 1248 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 OSTCP5-201ENST00000425293 453 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AC017019.1-201ENST00000426129 261 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 HMGN2P24-201ENST00000433516 273 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 GTF2IP7-202ENST00000436677 309 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AC098614.3-201ENST00000438957 440 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AL358794.1-201ENST00000445689 381 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AL135929.1-201ENST00000449287 552 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AL356390.1-201ENST00000455684 397 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 MTND3P7-201ENST00000474435 343 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 OR7E22P-201ENST00000478335 1035 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 GNPDA1-212ENST00000513454 980 ntTSL 5 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AC010476.1-201ENST00000519111 851 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 IGHVIII-82-201ENST00000522058 250 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 HMGB1P1-201ENST00000522557 636 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AP000445.1-201ENST00000526692 741 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 OR4A2P-201ENST00000527276 913 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 MTND2P26-201ENST00000528255 1029 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 SSR2-215ENST00000529008 849 ntTSL 5 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 TPRXL-211ENST00000532880 754 ntTSL 2 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 PSMC1P8-201ENST00000536820 1296 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AC078950.1-204ENST00000540635 523 ntTSL 3 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AC006518.2-201ENST00000542513 940 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AGGF1P9-201ENST00000561884 913 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AC093283.1-201ENST00000565306 1075 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AC079395.2-201ENST00000610982 737 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AC010333.3-201ENST00000615100 402 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AC087742.2-201ENST00000616113 740 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AC091932.2-201ENST00000623014 291 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 LINC00216-201ENST00000623548 1126 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 WDR11-AS1-207ENST00000630905 769 ntTSL 2 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AC108724.2-201ENST00000634593 290 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AC026464.2-201ENST00000567834 2421 ntBASIC7.21□□□□□ -1.26
ATG4DQ86TL0 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 FHL1-230ENST00000630084 1335 ntTSL 2 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ATG4DQ86TL0 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AC114786.2-201ENST00000510090 1426 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 ZNF876P-202ENST00000398732 1485 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 PSG9-203ENST00000291752 1055 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 GZMB-203ENST00000382542 666 ntTSL 2 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 EEF1AKMT1-202ENST00000382758 1042 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 RNU6-1215P-201ENST00000384441 102 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AC016734.1-201ENST00000436998 654 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AC097358.1-201ENST00000438827 582 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 ST13P2-201ENST00000438916 1109 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AL391361.2-202ENST00000454826 439 ntTSL 5 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 RN7SL65P-201ENST00000485221 315 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms