Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SSR1P43307 AL049634.1-201ENST00000453770 1720 ntBASIC7.61□□□□□ -1.19
SSR1P43307 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
SSR1P43307 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SSR1P43307 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.61□□□□□ -1.19
SSR1P43307 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
SSR1P43307 KARSP2-201ENST00000415696 1639 ntBASIC7.61□□□□□ -1.19
SSR1P43307 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SSR1P43307 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SSR1P43307 NRIR-201ENST00000366140 799 ntTSL 3 BASIC7.61□□□□□ -1.19
SSR1P43307 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC7.61□□□□□ -1.19
SSR1P43307 RNU6-1055P-201ENST00000391085 107 ntBASIC7.61□□□□□ -1.19
SSR1P43307 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC7.61□□□□□ -1.19
SSR1P43307 SUMO2P13-201ENST00000403109 272 ntBASIC7.61□□□□□ -1.19
SSR1P43307 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.61□□□□□ -1.19
SSR1P43307 AC009413.1-201ENST00000414823 399 ntBASIC7.61□□□□□ -1.19
SSR1P43307 AC020983.1-201ENST00000417063 543 ntBASIC7.61□□□□□ -1.19
SSR1P43307 FTOP1-201ENST00000419363 861 ntBASIC7.61□□□□□ -1.19
SSR1P43307 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.61□□□□□ -1.19
SSR1P43307 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC7.61□□□□□ -1.19
SSR1P43307 BX119917.1-201ENST00000432517 502 ntBASIC7.61□□□□□ -1.19
SSR1P43307 AC007790.1-201ENST00000439081 782 ntBASIC7.61□□□□□ -1.19
SSR1P43307 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC7.61□□□□□ -1.19
SSR1P43307 RN7SL791P-201ENST00000467868 295 ntBASIC7.61□□□□□ -1.19
SSR1P43307 RN7SL88P-201ENST00000480166 299 ntBASIC7.61□□□□□ -1.19
SSR1P43307 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.61□□□□□ -1.19
SSR1P43307 SUMO2P7-201ENST00000511179 285 ntBASIC7.61□□□□□ -1.19
SSR1P43307 AC090539.2-201ENST00000523425 671 ntBASIC7.61□□□□□ -1.19
SSR1P43307 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SSR1P43307 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC7.61□□□□□ -1.19
SSR1P43307 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SSR1P43307 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SSR1P43307 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.61□□□□□ -1.19
SSR1P43307 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.61□□□□□ -1.19
SSR1P43307 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC7.61□□□□□ -1.19
SSR1P43307 MIR3187-201ENST00000583431 70 ntBASIC7.61□□□□□ -1.19
SSR1P43307 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.61□□□□□ -1.19
SSR1P43307 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.61□□□□□ -1.19
SSR1P43307 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.61□□□□□ -1.19
SSR1P43307 TMEM14EP-202ENST00000639378 1296 ntBASIC7.61□□□□□ -1.19
SSR1P43307 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC7.61□□□□□ -1.19
SSR1P43307 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
SSR1P43307 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
SSR1P43307 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SSR1P43307 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SSR1P43307 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC7.61□□□□□ -1.19
SSR1P43307 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
SSR1P43307 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.61□□□□□ -1.19
SSR1P43307 AL157713.1-201ENST00000379752 1531 ntBASIC7.61□□□□□ -1.19
SSR1P43307 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.61□□□□□ -1.19
SSR1P43307 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.61□□□□□ -1.19
SSR1P43307 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SSR1P43307 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SSR1P43307 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.6□□□□□ -1.19
SSR1P43307 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SSR1P43307 BRD7P1-201ENST00000557705 1915 ntBASIC7.6□□□□□ -1.19
SSR1P43307 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SSR1P43307 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SSR1P43307 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
SSR1P43307 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SSR1P43307 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SSR1P43307 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SSR1P43307 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SSR1P43307 RNA5SP260-201ENST00000363849 111 ntBASIC7.6□□□□□ -1.19
SSR1P43307 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SSR1P43307 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SSR1P43307 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC7.6□□□□□ -1.19
SSR1P43307 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SSR1P43307 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC7.6□□□□□ -1.19
SSR1P43307 FDPSP8-201ENST00000438304 1089 ntBASIC7.6□□□□□ -1.19
SSR1P43307 AL591379.2-201ENST00000450223 397 ntBASIC7.6□□□□□ -1.19
SSR1P43307 PMS2P11-201ENST00000451831 574 ntBASIC7.6□□□□□ -1.19
SSR1P43307 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SSR1P43307 AGKP1-201ENST00000455254 1263 ntBASIC7.6□□□□□ -1.19
SSR1P43307 AC008040.4-201ENST00000494834 768 ntBASIC7.6□□□□□ -1.19
SSR1P43307 Z99943.2-201ENST00000507585 266 ntBASIC7.6□□□□□ -1.19
SSR1P43307 AC146944.3-201ENST00000509969 371 ntBASIC7.6□□□□□ -1.19
SSR1P43307 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC7.6□□□□□ -1.19
SSR1P43307 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC7.6□□□□□ -1.19
SSR1P43307 IGLVI-42-201ENST00000522485 381 ntBASIC7.6□□□□□ -1.19
SSR1P43307 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SSR1P43307 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
SSR1P43307 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC7.6□□□□□ -1.19
SSR1P43307 HMGN2P47-201ENST00000559378 272 ntBASIC7.6□□□□□ -1.19
SSR1P43307 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC7.6□□□□□ -1.19
SSR1P43307 AL355333.1-201ENST00000605632 279 ntBASIC7.6□□□□□ -1.19
SSR1P43307 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC7.6□□□□□ -1.19
SSR1P43307 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC7.6□□□□□ -1.19
SSR1P43307 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC7.6□□□□□ -1.19
SSR1P43307 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SSR1P43307 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC7.6□□□□□ -1.19
SSR1P43307 AP000550.3-201ENST00000637734 379 ntBASIC7.6□□□□□ -1.19
SSR1P43307 CASC19-212ENST00000641153 1287 ntBASIC7.6□□□□□ -1.19
SSR1P43307 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SSR1P43307 AP000432.2-201ENST00000624164 2048 ntBASIC7.6□□□□□ -1.19
SSR1P43307 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
SSR1P43307 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
SSR1P43307 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SSR1P43307 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC7.6□□□□□ -1.19
SSR1P43307 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms