Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 RNU12-2P-201ENST00000364789 156 ntBASIC7.42□□□□□ -1.22
LMO3Q8TAP4 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 NMNAT1P3-201ENST00000457517 888 ntBASIC7.42□□□□□ -1.22
LMO3Q8TAP4 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 PPP1R2P6-201ENST00000478565 588 ntBASIC7.42□□□□□ -1.22
LMO3Q8TAP4 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 DCN-215ENST00000550099 719 ntTSL 2 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 AL132640.1-201ENST00000559594 619 ntBASIC7.42□□□□□ -1.22
LMO3Q8TAP4 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 MIR5682-201ENST00000584864 76 ntBASIC7.42□□□□□ -1.22
LMO3Q8TAP4 AC007255.2-201ENST00000604053 631 ntBASIC7.42□□□□□ -1.22
LMO3Q8TAP4 AC012511.1-201ENST00000608140 449 ntBASIC7.42□□□□□ -1.22
LMO3Q8TAP4 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 SNORA16A-202ENST00000628458 135 ntBASIC7.42□□□□□ -1.22
LMO3Q8TAP4 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 TATDN2P3-201ENST00000452855 3665 ntBASIC7.42□□□□□ -1.22
LMO3Q8TAP4 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LMO3Q8TAP4 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 HYDIN2-203ENST00000614586 13885 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 LPAL2-203ENST00000454031 2498 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 AC008171.1-201ENST00000395058 200 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 PDCL3P5-201ENST00000398028 722 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 RN7SKP30-201ENST00000411373 334 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 AC024937.2-201ENST00000411669 1242 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 SNRPEP5-201ENST00000425442 278 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 OR52U1P-201ENST00000439752 923 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 GOT2P2-201ENST00000450663 1251 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 RPL7AP71-201ENST00000451120 739 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 RN7SKP242-201ENST00000515967 289 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 FAM30C-201ENST00000561158 410 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 MRPL45P2-203ENST00000573318 473 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 CTSLP2-201ENST00000580501 394 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 MIR4428-201ENST00000584884 73 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 AC020765.1-201ENST00000604296 328 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LMO3Q8TAP4 MAPK10-371ENST00000641952 5209 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 RACGAP1P-201ENST00000550663 1879 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 AC105114.1-201ENST00000624795 1862 ntBASIC7.41□□□□□ -1.22
LMO3Q8TAP4 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.4□□□□□ -1.22
LMO3Q8TAP4 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LMO3Q8TAP4 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.22
LMO3Q8TAP4 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
LMO3Q8TAP4 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.4□□□□□ -1.22
LMO3Q8TAP4 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LMO3Q8TAP4 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.4□□□□□ -1.22
LMO3Q8TAP4 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.4□□□□□ -1.22
LMO3Q8TAP4 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms