Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 OR5BK1P-201ENST00000550421 823 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 CHEK2P2-201ENST00000554701 672 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 AC091544.5-201ENST00000620192 3815 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 RAB28P4-201ENST00000622233 665 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 AC009166.2-201ENST00000624410 2833 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
VPS8Q8N3P4 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VPS8Q8N3P4 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
VPS8Q8N3P4 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC10.74□□□□□ -0.69
VPS8Q8N3P4 AL355974.1-201ENST00000618896 1708 ntBASIC10.74□□□□□ -0.69
VPS8Q8N3P4 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VPS8Q8N3P4 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VPS8Q8N3P4 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS8Q8N3P4 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC10.74□□□□□ -0.69
VPS8Q8N3P4 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS8Q8N3P4 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC10.74□□□□□ -0.69
VPS8Q8N3P4 ATP6V1G1P4-201ENST00000438388 335 ntBASIC10.74□□□□□ -0.69
VPS8Q8N3P4 RPS4XP17-201ENST00000479057 754 ntBASIC10.74□□□□□ -0.69
VPS8Q8N3P4 RPS7P11-201ENST00000484240 586 ntBASIC10.74□□□□□ -0.69
VPS8Q8N3P4 AC026826.1-201ENST00000493002 361 ntBASIC10.74□□□□□ -0.69
VPS8Q8N3P4 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
VPS8Q8N3P4 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC10.74□□□□□ -0.69
VPS8Q8N3P4 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC10.74□□□□□ -0.69
VPS8Q8N3P4 AC068408.1-201ENST00000577406 1144 ntBASIC10.74□□□□□ -0.69
VPS8Q8N3P4 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC10.74□□□□□ -0.69
VPS8Q8N3P4 AC018692.2-201ENST00000624130 348 ntBASIC10.74□□□□□ -0.69
VPS8Q8N3P4 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC10.74□□□□□ -0.69
VPS8Q8N3P4 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS8Q8N3P4 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
VPS8Q8N3P4 FANCD2P2-201ENST00000437591 1400 ntBASIC10.74□□□□□ -0.69
VPS8Q8N3P4 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VPS8Q8N3P4 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 RPL24P4-201ENST00000326586 421 ntBASIC10.73□□□□□ -0.69
VPS8Q8N3P4 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 CDK7P1-201ENST00000434574 693 ntBASIC10.73□□□□□ -0.69
VPS8Q8N3P4 RN7SL216P-201ENST00000471607 298 ntBASIC10.73□□□□□ -0.69
VPS8Q8N3P4 RPL5P11-201ENST00000498068 893 ntBASIC10.73□□□□□ -0.69
VPS8Q8N3P4 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 AL035425.4-201ENST00000624509 1063 ntBASIC10.73□□□□□ -0.69
VPS8Q8N3P4 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VPS8Q8N3P4 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 LRRC37A12P-201ENST00000454917 1801 ntBASIC10.72□□□□□ -0.69
VPS8Q8N3P4 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 VDAC1P2-201ENST00000423609 850 ntBASIC10.72□□□□□ -0.69
VPS8Q8N3P4 GAPDHP57-201ENST00000424400 585 ntBASIC10.72□□□□□ -0.69
VPS8Q8N3P4 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 CEACAMP11-201ENST00000455211 583 ntBASIC10.72□□□□□ -0.69
VPS8Q8N3P4 OR13C1P-201ENST00000457612 963 ntBASIC10.72□□□□□ -0.69
VPS8Q8N3P4 SNX18P23-201ENST00000510867 677 ntBASIC10.72□□□□□ -0.69
VPS8Q8N3P4 OR9L1P-201ENST00000529493 933 ntBASIC10.72□□□□□ -0.69
VPS8Q8N3P4 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 NQO2-209ENST00000606474 470 ntTSL 3 BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 AC025287.2-201ENST00000621911 668 ntBASIC10.72□□□□□ -0.69
VPS8Q8N3P4 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC10.72□□□□□ -0.69
VPS8Q8N3P4 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VPS8Q8N3P4 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms