Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 CEACAMP5-201ENST00000448037 961 ntBASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 AC005517.1-201ENST00000452091 489 ntBASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 SNORA35.1-201ENST00000458908 128 ntBASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 AC091982.1-202ENST00000473923 343 ntBASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 AC106800.2-201ENST00000514009 1103 ntBASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 AC090971.3-201ENST00000557871 1041 ntBASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 IGLJCOR18-201ENST00000584002 424 ntBASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 AC024451.4-201ENST00000602578 752 ntBASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZNF549Q6P9A3 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC6.96□□□□□ -1.29
ZNF549Q6P9A3 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
ZNF549Q6P9A3 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.96□□□□□ -1.29
ZNF549Q6P9A3 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
ZNF549Q6P9A3 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.96□□□□□ -1.29
ZNF549Q6P9A3 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.96□□□□□ -1.29
ZNF549Q6P9A3 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.29
ZNF549Q6P9A3 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
ZNF549Q6P9A3 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
ZNF549Q6P9A3 MAPK10-383ENST00000642032 3390 ntBASIC6.96□□□□□ -1.29
ZNF549Q6P9A3 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.96□□□□□ -1.29
ZNF549Q6P9A3 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 SYT14P1-202ENST00000600441 1448 ntBASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 RPS3AP5-201ENST00000389400 821 ntBASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 AC009500.1-201ENST00000420684 583 ntBASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 PSMC1P2-201ENST00000423961 1204 ntBASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 AL604028.2-201ENST00000437848 788 ntBASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 WBP1LP1-201ENST00000460451 896 ntBASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 AP000805.1-201ENST00000471604 784 ntBASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 BLNK-209ENST00000495266 440 ntTSL 5 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 ACTG1P15-201ENST00000570019 1063 ntBASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 MRPL45P2-203ENST00000573318 473 ntBASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 FRG2MP-201ENST00000613317 856 ntBASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 TMEM14EP-202ENST00000639378 1296 ntBASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.96□□□□□ -1.3
ZNF549Q6P9A3 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AP002800.1-201ENST00000624982 2225 ntBASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 SNORA70.5-201ENST00000365519 135 ntBASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 MTND6P1-201ENST00000417434 424 ntBASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 CHCHD3P1-201ENST00000425516 676 ntBASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms