Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RB1P06400 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RB1P06400 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
RB1P06400 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RB1P06400 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
RB1P06400 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.58□□□□□ -1.2
RB1P06400 SNORA68-201ENST00000384437 133 ntBASIC7.58□□□□□ -1.2
RB1P06400 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.58□□□□□ -1.2
RB1P06400 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.58□□□□□ -1.2
RB1P06400 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC7.58□□□□□ -1.2
RB1P06400 UQCRHP1-204ENST00000424609 274 ntBASIC7.58□□□□□ -1.2
RB1P06400 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.58□□□□□ -1.2
RB1P06400 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.58□□□□□ -1.2
RB1P06400 AC245291.3-201ENST00000443400 292 ntBASIC7.58□□□□□ -1.2
RB1P06400 AC092601.1-201ENST00000444526 383 ntBASIC7.58□□□□□ -1.2
RB1P06400 AC118758.1-202ENST00000454719 225 ntBASIC7.58□□□□□ -1.2
RB1P06400 PSPC1P2-201ENST00000455130 225 ntBASIC7.58□□□□□ -1.2
RB1P06400 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.58□□□□□ -1.2
RB1P06400 AC122718.2-201ENST00000505325 591 ntBASIC7.58□□□□□ -1.2
RB1P06400 RPL10P18-201ENST00000519384 309 ntBASIC7.58□□□□□ -1.2
RB1P06400 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.58□□□□□ -1.2
RB1P06400 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.58□□□□□ -1.2
RB1P06400 MT1CP-201ENST00000567054 174 ntBASIC7.58□□□□□ -1.2
RB1P06400 AC040162.2-201ENST00000573092 157 ntBASIC7.58□□□□□ -1.2
RB1P06400 RN7SL178P-201ENST00000582930 304 ntBASIC7.58□□□□□ -1.2
RB1P06400 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.58□□□□□ -1.2
RB1P06400 AC068213.1-201ENST00000625124 226 ntBASIC7.58□□□□□ -1.2
RB1P06400 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC7.58□□□□□ -1.2
RB1P06400 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
RB1P06400 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RB1P06400 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RB1P06400 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.58□□□□□ -1.2
RB1P06400 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RB1P06400 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RB1P06400 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
RB1P06400 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RB1P06400 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
RB1P06400 AC092701.1-201ENST00000623627 1551 ntBASIC7.58□□□□□ -1.2
RB1P06400 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RB1P06400 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RB1P06400 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
RB1P06400 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.57□□□□□ -1.2
RB1P06400 AC091544.5-201ENST00000620192 3815 ntBASIC7.57□□□□□ -1.2
RB1P06400 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RB1P06400 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
RB1P06400 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RB1P06400 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RB1P06400 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RB1P06400 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RB1P06400 FAM204BP-201ENST00000369171 701 ntBASIC7.57□□□□□ -1.2
RB1P06400 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RB1P06400 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
RB1P06400 ETF1P1-206ENST00000427296 984 ntBASIC7.57□□□□□ -1.2
RB1P06400 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RB1P06400 RPL5P10-201ENST00000445207 894 ntBASIC7.57□□□□□ -1.2
RB1P06400 EEF1B2P3-201ENST00000447718 678 ntBASIC7.57□□□□□ -1.2
RB1P06400 CTSLP6-201ENST00000458273 1002 ntBASIC7.57□□□□□ -1.2
RB1P06400 PPP1R2P6-201ENST00000478565 588 ntBASIC7.57□□□□□ -1.2
RB1P06400 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.57□□□□□ -1.2
RB1P06400 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC7.57□□□□□ -1.2
RB1P06400 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.57□□□□□ -1.2
RB1P06400 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC7.57□□□□□ -1.2
RB1P06400 MIR4732-201ENST00000581873 76 ntBASIC7.57□□□□□ -1.2
RB1P06400 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC7.57□□□□□ -1.2
RB1P06400 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.57□□□□□ -1.2
RB1P06400 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC7.57□□□□□ -1.2
RB1P06400 AL049541.2-201ENST00000626377 555 ntBASIC7.57□□□□□ -1.2
RB1P06400 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RB1P06400 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RB1P06400 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RB1P06400 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.57□□□□□ -1.2
RB1P06400 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RB1P06400 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RB1P06400 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RB1P06400 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.57□□□□□ -1.2
RB1P06400 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RB1P06400 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RB1P06400 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RB1P06400 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RB1P06400 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.56□□□□□ -1.2
RB1P06400 USP9YP3-201ENST00000434481 1766 ntBASIC7.56□□□□□ -1.2
RB1P06400 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC7.56□□□□□ -1.2
RB1P06400 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RB1P06400 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RB1P06400 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RB1P06400 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RB1P06400 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RB1P06400 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.56□□□□□ -1.2
RB1P06400 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RB1P06400 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.56□□□□□ -1.2
RB1P06400 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RB1P06400 RN7SKP254-201ENST00000410685 310 ntBASIC7.56□□□□□ -1.2
RB1P06400 UBTFL2-201ENST00000411859 1191 ntBASIC7.56□□□□□ -1.2
RB1P06400 GEMIN2P2-201ENST00000418195 715 ntBASIC7.56□□□□□ -1.2
RB1P06400 AL022100.1-202ENST00000421214 548 ntBASIC7.56□□□□□ -1.2
RB1P06400 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.56□□□□□ -1.2
RB1P06400 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
RB1P06400 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.56□□□□□ -1.2
RB1P06400 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC7.56□□□□□ -1.2
RB1P06400 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms