Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC7.02□□□□□ -1.29
VMP1Q96GC9 AC009950.2-201ENST00000636548 183 ntBASIC7.02□□□□□ -1.29
VMP1Q96GC9 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.02□□□□□ -1.29
VMP1Q96GC9 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
VMP1Q96GC9 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VMP1Q96GC9 SPATA31C1-201ENST00000420021 3895 ntBASIC7.02□□□□□ -1.29
VMP1Q96GC9 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
VMP1Q96GC9 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.02□□□□□ -1.29
VMP1Q96GC9 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
VMP1Q96GC9 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
VMP1Q96GC9 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.02□□□□□ -1.29
VMP1Q96GC9 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
VMP1Q96GC9 AC138915.4-201ENST00000565549 4147 ntBASIC7.02□□□□□ -1.29
VMP1Q96GC9 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
VMP1Q96GC9 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 DDX50P1-201ENST00000438163 2400 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 AC113608.1-201ENST00000398740 305 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 NUS1P4-201ENST00000401550 585 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 SNORA2C-201ENST00000408564 137 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 OR52I1-201ENST00000450052 1050 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 AC005550.2-201ENST00000476382 318 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 AC079944.1-201ENST00000485426 495 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 MTCO1P55-201ENST00000489829 745 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 AC233724.10-201ENST00000510454 409 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 AC012181.2-201ENST00000570210 699 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 PPIAP14-201ENST00000577627 496 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 CUX2P1-201ENST00000606426 298 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 AC012511.1-201ENST00000608140 449 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 AL121583.1-201ENST00000612444 682 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 AC006335.3-201ENST00000613408 292 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 RN7SL680P-201ENST00000620379 299 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 FOLH1B-202ENST00000529567 2145 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 AL157831.2-201ENST00000564681 3095 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 HSPD1P1-201ENST00000503199 1726 ntBASIC7.01□□□□□ -1.29
VMP1Q96GC9 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.01□□□□□ -1.29
VMP1Q96GC9 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VMP1Q96GC9 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7□□□□□ -1.29
VMP1Q96GC9 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7□□□□□ -1.29
VMP1Q96GC9 TMC3-AS1-206ENST00000612811 2726 ntBASIC7□□□□□ -1.29
VMP1Q96GC9 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VMP1Q96GC9 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VMP1Q96GC9 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7□□□□□ -1.29
VMP1Q96GC9 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7□□□□□ -1.29
VMP1Q96GC9 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7□□□□□ -1.29
VMP1Q96GC9 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
VMP1Q96GC9 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7□□□□□ -1.29
VMP1Q96GC9 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VMP1Q96GC9 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7□□□□□ -1.29
VMP1Q96GC9 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VMP1Q96GC9 LPAL2-203ENST00000454031 2498 ntBASIC7□□□□□ -1.29
VMP1Q96GC9 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7□□□□□ -1.29
VMP1Q96GC9 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
VMP1Q96GC9 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
VMP1Q96GC9 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7□□□□□ -1.29
VMP1Q96GC9 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VMP1Q96GC9 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VMP1Q96GC9 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC7□□□□□ -1.29
VMP1Q96GC9 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
VMP1Q96GC9 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7□□□□□ -1.29
VMP1Q96GC9 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC7□□□□□ -1.29
VMP1Q96GC9 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7□□□□□ -1.29
VMP1Q96GC9 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC7□□□□□ -1.29
VMP1Q96GC9 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms