Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 ARHGAP42P5-201ENST00000548856 2936 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 FOLH1B-202ENST00000529567 2145 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 FLJ42393-201ENST00000623801 2270 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC107977.1-201ENST00000355745 939 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 PTMAP8-201ENST00000397729 342 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 ZNF736P7Y-201ENST00000425158 820 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 SNX18P14-201ENST00000429308 574 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AK3P5-201ENST00000432033 519 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AL583856.1-201ENST00000454078 1101 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 CHIAP1-201ENST00000456220 995 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 DUXAP8-207ENST00000456786 622 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 PRELID3BP6-201ENST00000503839 571 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC021146.10-201ENST00000515628 706 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC100854.1-201ENST00000520351 341 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC087888.1-201ENST00000550884 1254 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 COX4I1P1-201ENST00000554239 509 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 COX6CP11-201ENST00000555293 229 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC005632.2-201ENST00000564271 828 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 DUXAP10-204ENST00000612052 616 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AL391903.2-201ENST00000614532 247 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC009464.1-201ENST00000615731 469 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 LINC00216-201ENST00000623548 1126 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC006963.1-201ENST00000624003 1052 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC087269.2-201ENST00000641764 975 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AL606490.2-201ENST00000457562 1330 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 KYNUP1-201ENST00000466683 1406 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 RPL31P11-201ENST00000426558 1558 ntBASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TRIM48Q8IWZ4 AC009948.3-201ENST00000603415 1798 ntBASIC7.4□□□□□ -1.23
TRIM48Q8IWZ4 AC008498.2-201ENST00000624033 2322 ntBASIC7.4□□□□□ -1.23
TRIM48Q8IWZ4 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
TRIM48Q8IWZ4 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
TRIM48Q8IWZ4 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
TRIM48Q8IWZ4 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 TRIM60P14-201ENST00000513444 1419 ntBASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 AC004986.1-201ENST00000414855 607 ntBASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 PPIAP30-201ENST00000415473 519 ntBASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.39□□□□□ -1.23
TRIM48Q8IWZ4 OR7E36P-201ENST00000419933 954 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms