Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
HOXD10P28358 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
HOXD10P28358 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
HOXD10P28358 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HOXD10P28358 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HOXD10P28358 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
HOXD10P28358 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
HOXD10P28358 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC8.11□□□□□ -1.11
HOXD10P28358 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
HOXD10P28358 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC8.11□□□□□ -1.11
HOXD10P28358 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
HOXD10P28358 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.11□□□□□ -1.11
HOXD10P28358 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC8.11□□□□□ -1.11
HOXD10P28358 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
HOXD10P28358 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC8.11□□□□□ -1.11
HOXD10P28358 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
HOXD10P28358 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC8.11□□□□□ -1.11
HOXD10P28358 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
HOXD10P28358 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
HOXD10P28358 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
HOXD10P28358 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC8.11□□□□□ -1.11
HOXD10P28358 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC8.11□□□□□ -1.11
HOXD10P28358 CHCHD3P1-201ENST00000425516 676 ntBASIC8.11□□□□□ -1.11
HOXD10P28358 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
HOXD10P28358 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC8.11□□□□□ -1.11
HOXD10P28358 EAF2-202ENST00000451944 960 ntTSL 2 BASIC8.11□□□□□ -1.11
HOXD10P28358 AC104339.1-201ENST00000465478 348 ntBASIC8.11□□□□□ -1.11
HOXD10P28358 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC8.11□□□□□ -1.11
HOXD10P28358 AC008967.1-201ENST00000504843 163 ntBASIC8.11□□□□□ -1.11
HOXD10P28358 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC8.11□□□□□ -1.11
HOXD10P28358 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC8.11□□□□□ -1.11
HOXD10P28358 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
HOXD10P28358 AC010323.2-201ENST00000596405 594 ntBASIC8.11□□□□□ -1.11
HOXD10P28358 WBP1LP12-201ENST00000604449 331 ntBASIC8.11□□□□□ -1.11
HOXD10P28358 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC8.11□□□□□ -1.11
HOXD10P28358 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
HOXD10P28358 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC8.11□□□□□ -1.11
HOXD10P28358 AL049541.2-201ENST00000626377 555 ntBASIC8.11□□□□□ -1.11
HOXD10P28358 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC8.11□□□□□ -1.11
HOXD10P28358 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC8.11□□□□□ -1.11
HOXD10P28358 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
HOXD10P28358 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC8.11□□□□□ -1.11
HOXD10P28358 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
HOXD10P28358 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC8.11□□□□□ -1.11
HOXD10P28358 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC8.11□□□□□ -1.11
HOXD10P28358 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
HOXD10P28358 AC012213.2-201ENST00000562917 4597 ntBASIC8.11□□□□□ -1.11
HOXD10P28358 CASC19-205ENST00000641013 1411 ntBASIC8.11□□□□□ -1.11
HOXD10P28358 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
HOXD10P28358 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
HOXD10P28358 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
HOXD10P28358 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
HOXD10P28358 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
HOXD10P28358 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.11□□□□□ -1.11
HOXD10P28358 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.1□□□□□ -1.11
HOXD10P28358 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC8.1□□□□□ -1.11
HOXD10P28358 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXD10P28358 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
HOXD10P28358 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
HOXD10P28358 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.1□□□□□ -1.11
HOXD10P28358 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HOXD10P28358 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXD10P28358 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HOXD10P28358 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HOXD10P28358 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
HOXD10P28358 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.1□□□□□ -1.11
HOXD10P28358 AC110716.2-201ENST00000563865 3945 ntBASIC8.1□□□□□ -1.11
HOXD10P28358 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXD10P28358 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXD10P28358 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXD10P28358 RNA5SP308-201ENST00000362532 115 ntBASIC8.1□□□□□ -1.11
HOXD10P28358 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
HOXD10P28358 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HOXD10P28358 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC8.1□□□□□ -1.11
HOXD10P28358 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HOXD10P28358 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
HOXD10P28358 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC8.1□□□□□ -1.11
HOXD10P28358 AL359715.1-201ENST00000404330 555 ntBASIC8.1□□□□□ -1.11
HOXD10P28358 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HOXD10P28358 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC8.1□□□□□ -1.11
HOXD10P28358 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HOXD10P28358 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXD10P28358 RPS3AP49-201ENST00000472161 790 ntBASIC8.1□□□□□ -1.11
HOXD10P28358 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXD10P28358 AC005363.1-201ENST00000530779 351 ntBASIC8.1□□□□□ -1.11
HOXD10P28358 OR9G2P-201ENST00000533326 880 ntBASIC8.1□□□□□ -1.11
HOXD10P28358 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC8.1□□□□□ -1.11
HOXD10P28358 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC8.1□□□□□ -1.11
HOXD10P28358 EIF4A3P1-201ENST00000578499 647 ntBASIC8.1□□□□□ -1.11
HOXD10P28358 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC8.1□□□□□ -1.11
HOXD10P28358 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC8.1□□□□□ -1.11
HOXD10P28358 AC011891.2-201ENST00000604949 397 ntBASIC8.1□□□□□ -1.11
HOXD10P28358 AC097641.3-201ENST00000613523 464 ntBASIC8.1□□□□□ -1.11
HOXD10P28358 AC012676.3-201ENST00000614983 479 ntBASIC8.1□□□□□ -1.11
HOXD10P28358 AC011471.4-201ENST00000638271 216 ntBASIC8.1□□□□□ -1.11
HOXD10P28358 AL121936.2-201ENST00000641935 662 ntBASIC8.1□□□□□ -1.11
HOXD10P28358 LINC00663-203ENST00000586885 2546 ntBASIC8.1□□□□□ -1.11
HOXD10P28358 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HOXD10P28358 AP002833.3-201ENST00000625075 2265 ntBASIC8.1□□□□□ -1.11
HOXD10P28358 AC010401.2-201ENST00000575137 4934 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms