Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
HLA-DOBP13765 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOBP13765 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOBP13765 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.34□□□□□ -1.39
HLA-DOBP13765 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOBP13765 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOBP13765 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOBP13765 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOBP13765 RPL10P16-201ENST00000325000 645 ntBASIC6.34□□□□□ -1.39
HLA-DOBP13765 AL590762.1-201ENST00000391782 432 ntBASIC6.34□□□□□ -1.39
HLA-DOBP13765 RN7SKP254-201ENST00000410685 310 ntBASIC6.34□□□□□ -1.39
HLA-DOBP13765 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 MYB-206ENST00000420123 1051 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 UQCRHP1-204ENST00000424609 274 ntBASIC6.34□□□□□ -1.39
HLA-DOBP13765 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 AC245047.1-201ENST00000433276 873 ntBASIC6.34□□□□□ -1.39
HLA-DOBP13765 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOBP13765 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 AC092421.1-201ENST00000448148 418 ntBASIC6.34□□□□□ -1.39
HLA-DOBP13765 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOBP13765 MRPL49P1-201ENST00000505951 535 ntBASIC6.34□□□□□ -1.39
HLA-DOBP13765 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 AP003084.1-201ENST00000524828 742 ntBASIC6.34□□□□□ -1.39
HLA-DOBP13765 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOBP13765 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 ULK4P1-202ENST00000565174 503 ntBASIC6.34□□□□□ -1.39
HLA-DOBP13765 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 AL161912.3-201ENST00000605404 628 ntBASIC6.34□□□□□ -1.39
HLA-DOBP13765 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOBP13765 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOBP13765 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOBP13765 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOBP13765 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOBP13765 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOBP13765 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOBP13765 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOBP13765 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DOBP13765 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DOBP13765 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HLA-DOBP13765 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.34□□□□□ -1.4
HLA-DOBP13765 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HLA-DOBP13765 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HLA-DOBP13765 ENO1P4-201ENST00000416471 1785 ntBASIC6.34□□□□□ -1.4
HLA-DOBP13765 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOBP13765 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOBP13765 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOBP13765 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOBP13765 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOBP13765 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOBP13765 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOBP13765 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOBP13765 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOBP13765 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOBP13765 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOBP13765 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 HMGN1P6-201ENST00000438508 291 ntBASIC6.33□□□□□ -1.4
HLA-DOBP13765 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.33□□□□□ -1.4
HLA-DOBP13765 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 PCMTD1P3-201ENST00000451824 472 ntBASIC6.33□□□□□ -1.4
HLA-DOBP13765 RPLP0P1-201ENST00000457002 361 ntBASIC6.33□□□□□ -1.4
HLA-DOBP13765 PABPC1P1-201ENST00000506347 591 ntBASIC6.33□□□□□ -1.4
HLA-DOBP13765 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 AC126177.6-201ENST00000550420 1009 ntBASIC6.33□□□□□ -1.4
HLA-DOBP13765 AC090971.3-201ENST00000557871 1041 ntBASIC6.33□□□□□ -1.4
HLA-DOBP13765 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 AL512356.3-201ENST00000623005 461 ntBASIC6.33□□□□□ -1.4
HLA-DOBP13765 AC004943.1-203ENST00000624370 1074 ntBASIC6.33□□□□□ -1.4
HLA-DOBP13765 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 FKBP1AP4-201ENST00000631775 336 ntBASIC6.33□□□□□ -1.4
HLA-DOBP13765 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOBP13765 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.33□□□□□ -1.4
HLA-DOBP13765 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOBP13765 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DOBP13765 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms