Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CXCL1P09341 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.39□□□□□ -1.55
CXCL1P09341 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CXCL1P09341 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC5.39□□□□□ -1.55
CXCL1P09341 AC087045.3-201ENST00000623046 2468 ntBASIC5.39□□□□□ -1.55
CXCL1P09341 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CXCL1P09341 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CXCL1P09341 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
CXCL1P09341 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CXCL1P09341 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CXCL1P09341 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CXCL1P09341 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CXCL1P09341 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CXCL1P09341 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL1P09341 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL1P09341 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.38□□□□□ -1.55
CXCL1P09341 AC007998.4-201ENST00000612496 2533 ntBASIC5.38□□□□□ -1.55
CXCL1P09341 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL1P09341 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL1P09341 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL1P09341 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC5.38□□□□□ -1.55
CXCL1P09341 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CXCL1P09341 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.38□□□□□ -1.55
CXCL1P09341 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL1P09341 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL1P09341 RNU1-47P-201ENST00000362966 163 ntBASIC5.38□□□□□ -1.55
CXCL1P09341 RNA5SP79-201ENST00000365193 109 ntBASIC5.38□□□□□ -1.55
CXCL1P09341 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL1P09341 AC074254.1-201ENST00000399152 404 ntTSL 5 BASIC5.38□□□□□ -1.55
CXCL1P09341 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC5.38□□□□□ -1.55
CXCL1P09341 SNORA2C-201ENST00000408564 137 ntBASIC5.38□□□□□ -1.55
CXCL1P09341 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CXCL1P09341 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CXCL1P09341 AC007568.1-201ENST00000422912 471 ntBASIC5.38□□□□□ -1.55
CXCL1P09341 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC5.38□□□□□ -1.55
CXCL1P09341 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC5.38□□□□□ -1.55
CXCL1P09341 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC5.38□□□□□ -1.55
CXCL1P09341 AL158168.1-201ENST00000443282 357 ntTSL 3 BASIC5.38□□□□□ -1.55
CXCL1P09341 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC5.38□□□□□ -1.55
CXCL1P09341 RN7SL505P-201ENST00000482644 293 ntBASIC5.38□□□□□ -1.55
CXCL1P09341 AC008799.2-201ENST00000484429 647 ntBASIC5.38□□□□□ -1.55
CXCL1P09341 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC5.38□□□□□ -1.55
CXCL1P09341 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL1P09341 AC024901.1-201ENST00000535764 718 ntTSL 3 BASIC5.38□□□□□ -1.55
CXCL1P09341 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC5.38□□□□□ -1.55
CXCL1P09341 EGLN3P1-201ENST00000541727 720 ntBASIC5.38□□□□□ -1.55
CXCL1P09341 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CXCL1P09341 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC5.38□□□□□ -1.55
CXCL1P09341 AC074051.4-201ENST00000564888 892 ntBASIC5.38□□□□□ -1.55
CXCL1P09341 MIR4793-201ENST00000577502 87 ntBASIC5.38□□□□□ -1.55
CXCL1P09341 AC023983.1-201ENST00000579347 567 ntTSL 5 BASIC5.38□□□□□ -1.55
CXCL1P09341 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC5.38□□□□□ -1.55
CXCL1P09341 AC005758.1-201ENST00000586408 625 ntBASIC5.38□□□□□ -1.55
CXCL1P09341 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC5.38□□□□□ -1.55
CXCL1P09341 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC5.38□□□□□ -1.55
CXCL1P09341 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC5.38□□□□□ -1.55
CXCL1P09341 AL359704.2-201ENST00000604335 521 ntBASIC5.38□□□□□ -1.55
CXCL1P09341 AC103724.4-201ENST00000605981 292 ntBASIC5.38□□□□□ -1.55
CXCL1P09341 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
CXCL1P09341 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC5.38□□□□□ -1.55
CXCL1P09341 AC073488.5-201ENST00000631993 754 ntBASIC5.38□□□□□ -1.55
CXCL1P09341 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
CXCL1P09341 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.38□□□□□ -1.55
CXCL1P09341 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.38□□□□□ -1.55
CXCL1P09341 PAX8-AS1-213ENST00000609210 1328 ntTSL 5 BASIC5.38□□□□□ -1.55
CXCL1P09341 AC087516.1-201ENST00000561236 2428 ntBASIC5.38□□□□□ -1.55
CXCL1P09341 AL357556.1-201ENST00000421884 1388 ntBASIC5.38□□□□□ -1.55
CXCL1P09341 TGFB2-OT1-201ENST00000625474 1371 ntBASIC5.38□□□□□ -1.55
CXCL1P09341 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC5.38□□□□□ -1.55
CXCL1P09341 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CXCL1P09341 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL1P09341 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.38□□□□□ -1.55
CXCL1P09341 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.38□□□□□ -1.55
CXCL1P09341 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CXCL1P09341 IRAK4-202ENST00000440781 1409 ntTSL 2 BASIC5.38□□□□□ -1.55
CXCL1P09341 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.38□□□□□ -1.55
CXCL1P09341 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.38□□□□□ -1.55
CXCL1P09341 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CXCL1P09341 OLFM5P-201ENST00000411807 1478 ntBASIC5.38□□□□□ -1.55
CXCL1P09341 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CXCL1P09341 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL1P09341 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.37□□□□□ -1.55
CXCL1P09341 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.37□□□□□ -1.55
CXCL1P09341 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.37□□□□□ -1.55
CXCL1P09341 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL1P09341 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.37□□□□□ -1.55
CXCL1P09341 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC5.37□□□□□ -1.55
CXCL1P09341 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CXCL1P09341 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL1P09341 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.37□□□□□ -1.55
CXCL1P09341 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL1P09341 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.37□□□□□ -1.55
CXCL1P09341 IL37-202ENST00000311328 652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL1P09341 IL37-205ENST00000353225 652 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL1P09341 SMIM30-201ENST00000397764 1070 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL1P09341 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC5.37□□□□□ -1.55
CXCL1P09341 PPIAP2-201ENST00000414143 492 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 AL035658.1-201ENST00000415054 357 ntTSL 3 BASIC5.37□□□□□ -1.55
CXCL1P09341 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL1P09341 RPSAP1-201ENST00000421328 880 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms