Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-DOAP06340 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-DOAP06340 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-DOAP06340 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
HLA-DOAP06340 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 RN7SKP189-201ENST00000365042 330 ntBASIC8.32□□□□□ -1.08
HLA-DOAP06340 RNA5SP152-201ENST00000365184 110 ntBASIC8.32□□□□□ -1.08
HLA-DOAP06340 AC092634.1-201ENST00000366505 199 ntBASIC8.32□□□□□ -1.08
HLA-DOAP06340 AL079341.1-201ENST00000404701 1207 ntBASIC8.32□□□□□ -1.08
HLA-DOAP06340 AL354794.2-201ENST00000424795 1248 ntBASIC8.32□□□□□ -1.08
HLA-DOAP06340 AP003385.1-201ENST00000426387 893 ntBASIC8.32□□□□□ -1.08
HLA-DOAP06340 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 AC010878.1-201ENST00000456500 1047 ntBASIC8.32□□□□□ -1.08
HLA-DOAP06340 RPL34P34-201ENST00000465389 354 ntBASIC8.32□□□□□ -1.08
HLA-DOAP06340 PPP1R2P6-201ENST00000478565 588 ntBASIC8.32□□□□□ -1.08
HLA-DOAP06340 RN7SL502P-201ENST00000481857 290 ntBASIC8.32□□□□□ -1.08
HLA-DOAP06340 RPL9P15-201ENST00000491096 532 ntBASIC8.32□□□□□ -1.08
HLA-DOAP06340 EIF4E2P2-201ENST00000492033 736 ntBASIC8.32□□□□□ -1.08
HLA-DOAP06340 AK6-203ENST00000502819 743 ntTSL 5 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 AC139713.1-202ENST00000512366 460 ntBASIC8.32□□□□□ -1.08
HLA-DOAP06340 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 OR4A1P-201ENST00000532342 920 ntBASIC8.32□□□□□ -1.08
HLA-DOAP06340 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 RN7SL66P-201ENST00000582099 264 ntBASIC8.32□□□□□ -1.08
HLA-DOAP06340 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HLA-DOAP06340 AC009955.2-201ENST00000597288 542 ntBASIC8.32□□□□□ -1.08
HLA-DOAP06340 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HLA-DOAP06340 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HLA-DOAP06340 HSPD1P10-201ENST00000404829 1676 ntBASIC8.32□□□□□ -1.08
HLA-DOAP06340 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HLA-DOAP06340 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HLA-DOAP06340 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
HLA-DOAP06340 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HLA-DOAP06340 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HLA-DOAP06340 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HLA-DOAP06340 MED6-212ENST00000615788 1700 ntTSL 5 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
HLA-DOAP06340 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-DOAP06340 AC095038.1-201ENST00000429248 1591 ntBASIC8.31□□□□□ -1.08
HLA-DOAP06340 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 RBMY1A3P-201ENST00000382670 1404 ntBASIC8.31□□□□□ -1.08
HLA-DOAP06340 RBPJP6-201ENST00000411556 1431 ntBASIC8.31□□□□□ -1.08
HLA-DOAP06340 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-DOAP06340 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-DOAP06340 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-DOAP06340 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-DOAP06340 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-DOAP06340 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-DOAP06340 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 PRELID1P2-201ENST00000407805 396 ntBASIC8.31□□□□□ -1.08
HLA-DOAP06340 MIR1266-201ENST00000408125 84 ntBASIC8.31□□□□□ -1.08
HLA-DOAP06340 RN7SKP205-201ENST00000410999 307 ntBASIC8.31□□□□□ -1.08
HLA-DOAP06340 PTPN2P1-201ENST00000423212 1072 ntBASIC8.31□□□□□ -1.08
HLA-DOAP06340 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 RN7SL160P-201ENST00000468558 284 ntBASIC8.31□□□□□ -1.08
HLA-DOAP06340 AP000805.1-201ENST00000471604 784 ntBASIC8.31□□□□□ -1.08
HLA-DOAP06340 SNRPCP11-201ENST00000492453 205 ntBASIC8.31□□□□□ -1.08
HLA-DOAP06340 AC009567.2-201ENST00000502989 349 ntBASIC8.31□□□□□ -1.08
HLA-DOAP06340 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-DOAP06340 MINOS1P4-201ENST00000515470 318 ntBASIC8.31□□□□□ -1.08
HLA-DOAP06340 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 ASB8-207ENST00000536953 923 ntTSL 2 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 MEG8-217ENST00000556637 924 ntTSL 5 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 AL137000.1-201ENST00000610528 1244 ntBASIC8.31□□□□□ -1.08
HLA-DOAP06340 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.31□□□□□ -1.08
HLA-DOAP06340 AC027348.2-201ENST00000624375 642 ntBASIC8.31□□□□□ -1.08
HLA-DOAP06340 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms