Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MTCO3P38-201ENST00000468910 766 ntBASIC9.28□□□□□ -0.92
ALDH1A1P00352 RPS17P11-201ENST00000474297 293 ntBASIC9.28□□□□□ -0.92
ALDH1A1P00352 AC093663.2-201ENST00000484625 313 ntBASIC9.28□□□□□ -0.92
ALDH1A1P00352 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC9.28□□□□□ -0.92
ALDH1A1P00352 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC9.28□□□□□ -0.92
ALDH1A1P00352 MTCYBP44-201ENST00000514835 823 ntBASIC9.28□□□□□ -0.92
ALDH1A1P00352 AC116347.2-201ENST00000514912 523 ntBASIC9.28□□□□□ -0.92
ALDH1A1P00352 RNA5SP459-201ENST00000516628 100 ntBASIC9.28□□□□□ -0.92
ALDH1A1P00352 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC9.28□□□□□ -0.92
ALDH1A1P00352 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC9.28□□□□□ -0.92
ALDH1A1P00352 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC9.28□□□□□ -0.92
ALDH1A1P00352 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC9.28□□□□□ -0.92
ALDH1A1P00352 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC9.28□□□□□ -0.92
ALDH1A1P00352 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC9.28□□□□□ -0.92
ALDH1A1P00352 AL354943.1-201ENST00000572103 781 ntBASIC9.28□□□□□ -0.92
ALDH1A1P00352 AC024614.1-201ENST00000577546 307 ntBASIC9.28□□□□□ -0.92
ALDH1A1P00352 AC090287.1-201ENST00000578374 291 ntBASIC9.28□□□□□ -0.92
ALDH1A1P00352 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
ALDH1A1P00352 AC113143.2-201ENST00000603849 394 ntBASIC9.28□□□□□ -0.92
ALDH1A1P00352 AL031601.1-201ENST00000605702 394 ntBASIC9.28□□□□□ -0.92
ALDH1A1P00352 AC004067.1-201ENST00000608733 700 ntBASIC9.28□□□□□ -0.92
ALDH1A1P00352 AL158063.1-201ENST00000615349 536 ntBASIC9.28□□□□□ -0.92
ALDH1A1P00352 AL121985.2-201ENST00000621192 555 ntBASIC9.28□□□□□ -0.92
ALDH1A1P00352 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
ALDH1A1P00352 AC079248.2-201ENST00000623779 326 ntBASIC9.28□□□□□ -0.92
ALDH1A1P00352 AL359697.1-201ENST00000624879 587 ntBASIC9.28□□□□□ -0.92
ALDH1A1P00352 ICK-201ENST00000350082 6116 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALDH1A1P00352 ENTPD1-203ENST00000371207 1903 ntTSL 2 BASIC9.28□□□□□ -0.92
ALDH1A1P00352 AP000552.1-202ENST00000436681 3714 ntTSL 5 BASIC9.28□□□□□ -0.92
ALDH1A1P00352 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALDH1A1P00352 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
ALDH1A1P00352 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALDH1A1P00352 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC9.28□□□□□ -0.92
ALDH1A1P00352 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALDH1A1P00352 AC007614.2-201ENST00000569877 1851 ntBASIC9.28□□□□□ -0.92
ALDH1A1P00352 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
ALDH1A1P00352 AC092683.1-204ENST00000610408 2830 ntTSL 2 BASIC9.27□□□□□ -0.92
ALDH1A1P00352 AC159540.2-202ENST00000613749 2830 ntTSL 2 BASIC9.27□□□□□ -0.92
ALDH1A1P00352 HKR1-213ENST00000589392 2152 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.92
ALDH1A1P00352 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC9.27□□□□□ -0.92
ALDH1A1P00352 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC9.27□□□□□ -0.92
ALDH1A1P00352 ZC3H14-203ENST00000318308 1384 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
ALDH1A1P00352 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALDH1A1P00352 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 ELF4-204ENST00000615377 3878 ntTSL 5 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 OTOA-202ENST00000388956 3466 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 UPRT-202ENST00000373379 2234 ntTSL 2 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
ALDH1A1P00352 ARMCX5-GPRASP2-206ENST00000476910 1848 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
ALDH1A1P00352 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
ALDH1A1P00352 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 DEFB105A-201ENST00000334773 330 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALDH1A1P00352 MIR16-2-201ENST00000362117 81 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 RNU6-468P-201ENST00000384003 109 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 ARL4AP5-201ENST00000404372 599 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 U3.38-201ENST00000408534 216 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 RNU2-16P-201ENST00000410712 136 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 RNU4-27P-201ENST00000410889 139 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 AL513175.2-201ENST00000422071 443 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 RPF2P1-201ENST00000424137 906 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 OFD1P13Y-201ENST00000431179 1232 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 USP9YP31-201ENST00000431405 881 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 PHB2P1-201ENST00000434943 890 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 SMYD1-202ENST00000438570 680 ntTSL 2 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 AC231532.1-201ENST00000438584 312 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 AC114755.5-201ENST00000447760 831 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 AL591379.2-201ENST00000450223 397 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 RPE-216ENST00000454822 2130 ntTSL 2 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 RPS4XP19-201ENST00000460237 736 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 AC008379.1-201ENST00000463655 464 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 SNRPD2P1-201ENST00000489253 354 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 AC079382.1-201ENST00000493346 557 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 FAM177A1P1-201ENST00000503598 473 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 AC114781.4-201ENST00000513707 639 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 AC118273.2-201ENST00000532092 465 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 NF1P12-201ENST00000549593 583 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 AC087883.1-201ENST00000551882 391 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 AL031281.2-201ENST00000606754 748 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 AL450489.1-201ENST00000612071 468 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 MIR8082-201ENST00000612488 81 ntBASIC9.27□□□□□ -0.93
ALDH1A1P00352 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 AC243725.1-201ENST00000637164 436 ntBASIC9.27□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms