Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 LINC01647-201ENST00000453135 1285 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 ZNF114P1-201ENST00000453500 292 ntBASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 RPL5P32-201ENST00000454085 879 ntBASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AP002345.1-201ENST00000456493 928 ntBASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 RNU6-956P-201ENST00000458868 103 ntBASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 IGKV1-16-201ENST00000479981 378 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 RN7SL472P-201ENST00000492799 293 ntBASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 NDUFB4P12-201ENST00000513465 390 ntBASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AC008632.1-201ENST00000519400 753 ntTSL 3 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AC089998.3-201ENST00000549715 493 ntBASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 MTCO1P2-201ENST00000554243 703 ntBASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 HNRNPCP1-201ENST00000556181 766 ntBASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AC007375.2-201ENST00000557752 603 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 FRG2HP-201ENST00000568807 832 ntBASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 MIMT1-201ENST00000597105 1050 ntBASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AC243960.5-201ENST00000597858 255 ntBASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AC018737.1-201ENST00000603900 204 ntBASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AC048344.3-201ENST00000605512 251 ntBASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AC018690.1-201ENST00000608144 626 ntBASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AC093838.1-201ENST00000613014 469 ntBASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AL121785.1-201ENST00000624745 708 ntBASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 PATE2-201ENST00000358524 1657 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 RAD9B-203ENST00000409246 2794 ntTSL 2 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 DCAF8-203ENST00000368074 3824 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 AC007938.1-201ENST00000562524 2902 ntBASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 ZNF615-208ENST00000598071 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 BUB1B-201ENST00000287598 3725 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CUEDC1Q9NWM3 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 PDZK1P1-202ENST00000425209 1350 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 GLULP5-201ENST00000547831 1390 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 SMIM12-204ENST00000446026 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 FBXL17-206ENST00000619412 4059 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 CTNNA2-217ENST00000540488 2792 ntTSL 5 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 NRG3-204ENST00000404576 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 IQCH-AS1-203ENST00000559298 5753 ntTSL 5 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 OR1F1-201ENST00000304646 942 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 ZNF254-201ENST00000339642 511 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 CENPW-201ENST00000368325 528 ntTSL 3 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 DYNLT3-202ENST00000378581 920 ntTSL 2 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AC136624.1-201ENST00000400791 413 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 RN7SKP154-201ENST00000410136 290 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 RN7SKP251-201ENST00000410830 314 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AC244157.1-201ENST00000415642 163 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 MTND4P3-201ENST00000417829 541 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AL117378.1-202ENST00000421310 601 ntTSL 5 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 CFL1P7-201ENST00000424759 486 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 ISX-AS1-201ENST00000427881 202 ntTSL 3 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 ATP5G1P5-201ENST00000429024 411 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 MTCO1P45-201ENST00000431457 267 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 USP12PX-201ENST00000432383 1057 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AL450311.1-201ENST00000434931 576 ntTSL 4 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AL590609.1-201ENST00000442164 328 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AC090954.1-201ENST00000445502 361 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AL020997.1-201ENST00000446554 349 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 NBPF2P-201ENST00000453025 661 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 LINC00945-201ENST00000453716 753 ntTSL 5 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 SLC17A1-203ENST00000468082 1242 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 RN7SL554P-201ENST00000468197 292 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AL135933.1-201ENST00000498657 802 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 CFL1P5-201ENST00000508046 502 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms