Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 LPAL2-203ENST00000454031 2498 ntBASIC7.32□□□□□ -1.24
PCDH9Q9HC56 RPL10P16-201ENST00000325000 645 ntBASIC7.32□□□□□ -1.24
PCDH9Q9HC56 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 RNU1-24P-201ENST00000364285 165 ntBASIC7.32□□□□□ -1.24
PCDH9Q9HC56 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 OR5P4P-201ENST00000424698 917 ntBASIC7.32□□□□□ -1.24
PCDH9Q9HC56 NPM1P30-201ENST00000425092 828 ntBASIC7.32□□□□□ -1.24
PCDH9Q9HC56 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 AF274573.1-201ENST00000430535 494 ntBASIC7.32□□□□□ -1.24
PCDH9Q9HC56 AC019185.3-201ENST00000438805 323 ntBASIC7.32□□□□□ -1.24
PCDH9Q9HC56 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 AC093799.1-201ENST00000452411 499 ntBASIC7.32□□□□□ -1.24
PCDH9Q9HC56 RN7SL705P-201ENST00000481678 294 ntBASIC7.32□□□□□ -1.24
PCDH9Q9HC56 CHCHD2P7-201ENST00000508008 452 ntBASIC7.32□□□□□ -1.24
PCDH9Q9HC56 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 EEF1B2P1-201ENST00000567221 672 ntBASIC7.32□□□□□ -1.24
PCDH9Q9HC56 RN7SL667P-201ENST00000582817 298 ntBASIC7.32□□□□□ -1.24
PCDH9Q9HC56 MIR4786-201ENST00000583954 80 ntBASIC7.32□□□□□ -1.24
PCDH9Q9HC56 AL589765.5-201ENST00000596133 515 ntBASIC7.32□□□□□ -1.24
PCDH9Q9HC56 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 AC211433.3-201ENST00000623770 375 ntBASIC7.32□□□□□ -1.24
PCDH9Q9HC56 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 RAD17P2-201ENST00000451754 1977 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 DDX43P1-201ENST00000510713 1763 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 EPS15P1-202ENST00000459691 2071 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 FAM204BP-201ENST00000369171 701 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 MIR301B-201ENST00000390813 78 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 TYMSP1-201ENST00000407851 869 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 RBM22P7-201ENST00000421321 280 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 PSMC1P2-201ENST00000423961 1204 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 RPSAP7-201ENST00000456871 885 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 MRPL49P1-201ENST00000505951 535 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 AC233290.1-201ENST00000553021 1186 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 PWRN1-212ENST00000569908 1435 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 AP001542.1-201ENST00000591314 200 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 AL136139.1-201ENST00000605568 222 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 FRG2MP-201ENST00000613317 856 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 MIR6731-201ENST00000614863 72 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 AC078909.2-201ENST00000620584 398 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 AC018558.4-201ENST00000622153 281 ntBASIC7.31□□□□□ -1.24
PCDH9Q9HC56 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms