Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LRCH3Q96II8 AC092427.1-201ENST00000439177 601 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 UBE2V1P3-201ENST00000439651 417 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 RPSAP27-201ENST00000442177 850 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 YWHABP1-201ENST00000445359 727 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 AC007327.1-201ENST00000447461 264 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 MEF2AP1-201ENST00000454867 863 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 AC092569.1-201ENST00000455192 258 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 DNAJC19P1-201ENST00000455312 319 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 AC083906.4-201ENST00000514634 987 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 RNA5SP303-201ENST00000516192 130 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 PSAT1P1-201ENST00000518968 1106 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 AP003064.1-201ENST00000526045 590 ntTSL 4 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 AC009120.2-203ENST00000565313 539 ntTSL 3 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 AC005379.1-201ENST00000585647 328 ntTSL 2 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 AC090241.1-201ENST00000587732 621 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 AP000860.1-201ENST00000605250 559 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 AC012557.1-201ENST00000607115 611 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 Metazoa_SRP.162-201ENST00000613066 277 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 AC016999.2-201ENST00000614692 556 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 HK1-206ENST00000448642 3868 ntTSL 5 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
LRCH3Q96II8 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LRCH3Q96II8 CNEP1R1-206ENST00000565556 1707 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LRCH3Q96II8 MTND5P26-201ENST00000426018 1752 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 CREM-207ENST00000356917 1895 ntTSL 2 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 GRIK2-202ENST00000358361 1981 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LRCH3Q96II8 MTA3-205ENST00000407270 2202 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
LRCH3Q96II8 THAP12P3-201ENST00000456373 2266 ntBASIC9.44□□□□□ -0.9
LRCH3Q96II8 SLAMF7-206ENST00000458104 2345 ntTSL 2 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 CIT-201ENST00000261833 8578 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
LRCH3Q96II8 AKAP4-202ENST00000376064 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LRCH3Q96II8 FAM107B-206ENST00000378470 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LRCH3Q96II8 RBBP9-201ENST00000337227 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LRCH3Q96II8 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LRCH3Q96II8 MYH1-201ENST00000226207 6024 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 FRMPD4-202ENST00000616992 7916 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
LRCH3Q96II8 ATXN1L-201ENST00000427980 7886 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LRCH3Q96II8 PTGS1-203ENST00000373698 4987 ntTSL 2 BASIC9.43□□□□□ -0.9
LRCH3Q96II8 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
LRCH3Q96II8 KCNE1-206ENST00000432085 3184 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LRCH3Q96II8 LINC01929-201ENST00000589125 3067 ntTSL 2 BASIC9.43□□□□□ -0.9
LRCH3Q96II8 FCGR3A-202ENST00000367969 2385 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LRCH3Q96II8 AL137025.1-201ENST00000436932 2378 ntTSL 2 BASIC9.43□□□□□ -0.9
LRCH3Q96II8 AC120114.2-201ENST00000567795 2272 ntBASIC9.43□□□□□ -0.9
LRCH3Q96II8 CDH26-201ENST00000244049 1931 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LRCH3Q96II8 C1orf27-203ENST00000419367 1900 ntTSL 2 BASIC9.43□□□□□ -0.9
LRCH3Q96II8 PHACTR2-AS1-201ENST00000450575 1699 ntTSL 5 BASIC9.43□□□□□ -0.9
LRCH3Q96II8 ZNF709-201ENST00000397732 4910 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LRCH3Q96II8 PSG5-201ENST00000342951 1626 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LRCH3Q96II8 FGG-205ENST00000407946 1636 ntTSL 5 BASIC9.43□□□□□ -0.9
LRCH3Q96II8 AC130365.1-201ENST00000530524 1553 ntBASIC9.43□□□□□ -0.9
LRCH3Q96II8 DPF3-215ENST00000610283 4520 ntTSL 2 BASIC9.43□□□□□ -0.9
LRCH3Q96II8 PXYLP1-207ENST00000508812 4158 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LRCH3Q96II8 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
LRCH3Q96II8 BLOC1S6-201ENST00000220531 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LRCH3Q96II8 CLEC2A-201ENST00000339766 732 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LRCH3Q96II8 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LRCH3Q96II8 RMRP-202ENST00000363046 264 ntBASIC9.43□□□□□ -0.9
LRCH3Q96II8 RNU4-73P-201ENST00000363164 141 ntBASIC9.43□□□□□ -0.9
LRCH3Q96II8 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
LRCH3Q96II8 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
LRCH3Q96II8 RPL31P1-201ENST00000398116 372 ntBASIC9.43□□□□□ -0.9
LRCH3Q96II8 TAF9BP2-201ENST00000400856 499 ntBASIC9.43□□□□□ -0.9
LRCH3Q96II8 ANXA2P3-201ENST00000404883 1008 ntBASIC9.43□□□□□ -0.9
LRCH3Q96II8 AC002524.1-201ENST00000411687 547 ntBASIC9.43□□□□□ -0.9
LRCH3Q96II8 BTF3P8-201ENST00000414577 526 ntBASIC9.43□□□□□ -0.9
LRCH3Q96II8 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC9.43□□□□□ -0.9
LRCH3Q96II8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC9.43□□□□□ -0.9
LRCH3Q96II8 RPS7P12-201ENST00000422385 582 ntBASIC9.43□□□□□ -0.9
LRCH3Q96II8 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC9.43□□□□□ -0.9
LRCH3Q96II8 OR4F13P-201ENST00000428478 931 ntBASIC9.43□□□□□ -0.9
LRCH3Q96II8 AC112492.2-201ENST00000432774 1030 ntBASIC9.43□□□□□ -0.9
LRCH3Q96II8 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LRCH3Q96II8 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC9.43□□□□□ -0.9
LRCH3Q96II8 GDI2P2-201ENST00000445131 608 ntBASIC9.43□□□□□ -0.9
LRCH3Q96II8 DPPA3P1-201ENST00000448050 469 ntBASIC9.43□□□□□ -0.9
LRCH3Q96II8 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC9.43□□□□□ -0.9
LRCH3Q96II8 AC073476.1-201ENST00000452854 407 ntBASIC9.43□□□□□ -0.9
LRCH3Q96II8 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms