Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AL049869.4-201ENST00000555669 178 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC044860.3-201ENST00000559957 368 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AGGF1P5-201ENST00000567900 919 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 MIR4685-201ENST00000578185 69 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC005412.1-201ENST00000580812 1049 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 MIR4437-201ENST00000581331 60 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 RPS28P1-201ENST00000604589 187 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 FAM27E3-202ENST00000614611 340 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AL359396.1-201ENST00000623151 2376 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AL645568.2-201ENST00000432815 1337 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 GTF2IP1-202ENST00000614592 2047 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 MFSD8-227ENST00000641393 4069 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 CSF2RA-206ENST00000381529 1816 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 RN7SKP211-201ENST00000363328 315 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 RNF11P2-201ENST00000427702 440 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 AC092634.2-201ENST00000428146 1010 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 FTH1P20-201ENST00000434913 548 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 AC019185.3-201ENST00000438805 323 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 ELOCP13-201ENST00000443934 329 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 RPS26P41-201ENST00000450370 284 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 RN7SL182P-201ENST00000496499 300 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 AC097263.1-201ENST00000496795 606 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 HSPE1P10-201ENST00000508631 558 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 RNU6-1102P-201ENST00000516149 96 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 SNX18P27-201ENST00000523611 779 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 SDHCP4-201ENST00000532834 510 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 AC139697.1-201ENST00000548429 745 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 CKS1BP1-201ENST00000555221 240 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 AC007136.1-201ENST00000589141 199 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 PART1_3.1-201ENST00000619680 131 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 ZNF710-AS1-202ENST00000620791 2133 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 AC007683.2-201ENST00000624681 714 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 MTND2P41-201ENST00000637599 773 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 AC119674.1-220ENST00000641502 1048 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 VEZF1P1-201ENST00000423931 1541 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 RNF19BPY-201ENST00000458209 1550 ntBASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM48Q8IWZ4 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms