Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 RPS2P25-201ENST00000467247 580 ntBASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 AC008040.4-201ENST00000494834 768 ntBASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 AC106774.2-201ENST00000510266 406 ntBASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 PGAM4P2-201ENST00000512491 721 ntBASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 AC106795.5-201ENST00000623288 454 ntBASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 ABCA11P-202ENST00000504019 2110 ntBASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 FOLH1B-202ENST00000529567 2145 ntBASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 AL596244.1-201ENST00000567068 3779 ntBASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 AC091390.2-201ENST00000432573 374 ntBASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 RPSAP62-201ENST00000432596 833 ntBASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 AC104698.1-201ENST00000435671 276 ntBASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 AC068522.1-201ENST00000482895 345 ntBASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 AC090539.2-201ENST00000523425 671 ntBASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 OR4F28P-201ENST00000559128 938 ntBASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 AC133569.1-201ENST00000564327 373 ntBASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 OR4F8P-201ENST00000589943 937 ntBASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 KDM5DP1-201ENST00000622542 298 ntBASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 AC007993.1-201ENST00000621298 2430 ntBASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 AC127070.3-201ENST00000503695 3263 ntBASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC50Q8IVM0 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms