Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL451074.4-201ENST00000447545 470 ntBASIC7.55□□□□□ -1.2
NEK3P51956 AC021074.2-201ENST00000468434 172 ntBASIC7.55□□□□□ -1.2
NEK3P51956 CEACAMP3-202ENST00000483806 638 ntBASIC7.55□□□□□ -1.2
NEK3P51956 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC7.55□□□□□ -1.2
NEK3P51956 RN7SKP242-201ENST00000515967 289 ntBASIC7.55□□□□□ -1.2
NEK3P51956 MTND2P7-201ENST00000521337 640 ntBASIC7.55□□□□□ -1.2
NEK3P51956 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.55□□□□□ -1.2
NEK3P51956 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.55□□□□□ -1.2
NEK3P51956 DPPA3P2-202ENST00000557188 1219 ntBASIC7.55□□□□□ -1.2
NEK3P51956 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC7.55□□□□□ -1.2
NEK3P51956 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC7.55□□□□□ -1.2
NEK3P51956 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.55□□□□□ -1.2
NEK3P51956 RN7SL178P-201ENST00000582930 304 ntBASIC7.55□□□□□ -1.2
NEK3P51956 EXOSC3P2-201ENST00000594464 497 ntBASIC7.55□□□□□ -1.2
NEK3P51956 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.55□□□□□ -1.2
NEK3P51956 AL035417.2-201ENST00000603887 796 ntBASIC7.55□□□□□ -1.2
NEK3P51956 GMCL1P2-201ENST00000605230 823 ntBASIC7.55□□□□□ -1.2
NEK3P51956 AC139792.1-201ENST00000607051 647 ntBASIC7.55□□□□□ -1.2
NEK3P51956 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.55□□□□□ -1.2
NEK3P51956 AC106795.5-201ENST00000623288 454 ntBASIC7.55□□□□□ -1.2
NEK3P51956 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC7.55□□□□□ -1.2
NEK3P51956 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
NEK3P51956 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
NEK3P51956 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NEK3P51956 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
NEK3P51956 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NEK3P51956 AL513548.1-201ENST00000562904 1724 ntBASIC7.55□□□□□ -1.2
NEK3P51956 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NEK3P51956 AL590065.1-201ENST00000603371 4774 ntBASIC7.55□□□□□ -1.2
NEK3P51956 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NEK3P51956 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NEK3P51956 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NEK3P51956 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.54□□□□□ -1.2
NEK3P51956 OR4C1P-202ENST00000641065 1569 ntBASIC7.54□□□□□ -1.2
NEK3P51956 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.54□□□□□ -1.2
NEK3P51956 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.54□□□□□ -1.2
NEK3P51956 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NEK3P51956 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NEK3P51956 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
NEK3P51956 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.54□□□□□ -1.2
NEK3P51956 AC022819.1-201ENST00000563495 3910 ntBASIC7.54□□□□□ -1.2
NEK3P51956 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
NEK3P51956 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NEK3P51956 ENO1P4-201ENST00000416471 1785 ntBASIC7.54□□□□□ -1.2
NEK3P51956 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
NEK3P51956 AC138915.4-201ENST00000565549 4147 ntBASIC7.54□□□□□ -1.2
NEK3P51956 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NEK3P51956 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NEK3P51956 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.54□□□□□ -1.2
NEK3P51956 RAD17P2-201ENST00000451754 1977 ntBASIC7.54□□□□□ -1.2
NEK3P51956 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
NEK3P51956 RNU6-819P-201ENST00000364116 107 ntBASIC7.54□□□□□ -1.2
NEK3P51956 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NEK3P51956 SSX6-201ENST00000376932 562 ntBASIC7.54□□□□□ -1.2
NEK3P51956 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
NEK3P51956 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC7.54□□□□□ -1.2
NEK3P51956 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.54□□□□□ -1.2
NEK3P51956 BX119917.1-201ENST00000432517 502 ntBASIC7.54□□□□□ -1.2
NEK3P51956 NIP7P1-201ENST00000433227 512 ntBASIC7.54□□□□□ -1.2
NEK3P51956 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC7.54□□□□□ -1.2
NEK3P51956 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.54□□□□□ -1.2
NEK3P51956 RN7SL180P-201ENST00000466769 294 ntBASIC7.54□□□□□ -1.2
NEK3P51956 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC7.54□□□□□ -1.2
NEK3P51956 AC005550.2-201ENST00000476382 318 ntBASIC7.54□□□□□ -1.2
NEK3P51956 AC008799.2-201ENST00000484429 647 ntBASIC7.54□□□□□ -1.2
NEK3P51956 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC7.54□□□□□ -1.2
NEK3P51956 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
NEK3P51956 AC106760.2-201ENST00000504159 619 ntBASIC7.54□□□□□ -1.2
NEK3P51956 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC7.54□□□□□ -1.2
NEK3P51956 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.54□□□□□ -1.2
NEK3P51956 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.54□□□□□ -1.2
NEK3P51956 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC7.54□□□□□ -1.2
NEK3P51956 AC016559.1-201ENST00000511420 199 ntBASIC7.54□□□□□ -1.2
NEK3P51956 GTF2IP11-201ENST00000526931 420 ntBASIC7.54□□□□□ -1.2
NEK3P51956 AC087257.2-201ENST00000538759 928 ntBASIC7.54□□□□□ -1.2
NEK3P51956 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC7.54□□□□□ -1.2
NEK3P51956 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC7.54□□□□□ -1.2
NEK3P51956 RN7SL657P-201ENST00000582431 293 ntBASIC7.54□□□□□ -1.2
NEK3P51956 U47924.1-201ENST00000606539 434 ntBASIC7.54□□□□□ -1.2
NEK3P51956 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC7.54□□□□□ -1.2
NEK3P51956 AL353684.1-201ENST00000622677 1120 ntBASIC7.54□□□□□ -1.2
NEK3P51956 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.54□□□□□ -1.2
NEK3P51956 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.54□□□□□ -1.2
NEK3P51956 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
NEK3P51956 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
NEK3P51956 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.54□□□□□ -1.2
NEK3P51956 AL133243.4-201ENST00000623116 3109 ntBASIC7.54□□□□□ -1.2
NEK3P51956 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.54□□□□□ -1.2
NEK3P51956 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.54□□□□□ -1.2
NEK3P51956 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NEK3P51956 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.54□□□□□ -1.2
NEK3P51956 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NEK3P51956 AL929601.4-201ENST00000613011 1341 ntBASIC7.53□□□□□ -1.2
NEK3P51956 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.53□□□□□ -1.2
NEK3P51956 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NEK3P51956 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.53□□□□□ -1.2
NEK3P51956 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NEK3P51956 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NEK3P51956 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.53□□□□□ -1.2
NEK3P51956 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms