Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
COL15A1P39059 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
COL15A1P39059 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
COL15A1P39059 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
COL15A1P39059 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC8.92□□□□□ -0.98
COL15A1P39059 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
COL15A1P39059 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC8.92□□□□□ -0.98
COL15A1P39059 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC8.92□□□□□ -0.98
COL15A1P39059 RPL17P17-201ENST00000419491 557 ntBASIC8.92□□□□□ -0.98
COL15A1P39059 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC8.92□□□□□ -0.98
COL15A1P39059 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC8.92□□□□□ -0.98
COL15A1P39059 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC8.92□□□□□ -0.98
COL15A1P39059 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
COL15A1P39059 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
COL15A1P39059 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC8.92□□□□□ -0.98
COL15A1P39059 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
COL15A1P39059 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC8.92□□□□□ -0.98
COL15A1P39059 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC8.92□□□□□ -0.98
COL15A1P39059 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
COL15A1P39059 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC8.92□□□□□ -0.98
COL15A1P39059 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC8.92□□□□□ -0.98
COL15A1P39059 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC8.92□□□□□ -0.98
COL15A1P39059 uc_338.29-201ENST00000615099 168 ntBASIC8.92□□□□□ -0.98
COL15A1P39059 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC8.92□□□□□ -0.98
COL15A1P39059 AC016251.1-201ENST00000624299 4198 ntBASIC8.92□□□□□ -0.98
COL15A1P39059 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
COL15A1P39059 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.92□□□□□ -0.98
COL15A1P39059 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
COL15A1P39059 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.92□□□□□ -0.98
COL15A1P39059 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
COL15A1P39059 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
COL15A1P39059 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
COL15A1P39059 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
COL15A1P39059 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
COL15A1P39059 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
COL15A1P39059 AL590004.4-201ENST00000566733 7060 ntBASIC8.92□□□□□ -0.98
COL15A1P39059 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC8.91□□□□□ -0.98
COL15A1P39059 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
COL15A1P39059 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
COL15A1P39059 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC8.91□□□□□ -0.98
COL15A1P39059 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
COL15A1P39059 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
COL15A1P39059 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
COL15A1P39059 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
COL15A1P39059 AC092646.2-201ENST00000431242 2095 ntBASIC8.91□□□□□ -0.98
COL15A1P39059 GMFG-201ENST00000253054 616 ntTSL 5 BASIC8.91□□□□□ -0.98
COL15A1P39059 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
COL15A1P39059 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
COL15A1P39059 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC8.91□□□□□ -0.98
COL15A1P39059 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
COL15A1P39059 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC8.91□□□□□ -0.98
COL15A1P39059 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC8.91□□□□□ -0.98
COL15A1P39059 AL358876.1-201ENST00000453364 1075 ntBASIC8.91□□□□□ -0.98
COL15A1P39059 AC010878.1-201ENST00000456500 1047 ntBASIC8.91□□□□□ -0.98
COL15A1P39059 RBMY2HP-201ENST00000457961 720 ntBASIC8.91□□□□□ -0.98
COL15A1P39059 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC8.91□□□□□ -0.98
COL15A1P39059 PGBD4P1-201ENST00000473644 407 ntBASIC8.91□□□□□ -0.98
COL15A1P39059 RN7SL37P-201ENST00000490461 307 ntBASIC8.91□□□□□ -0.98
COL15A1P39059 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.91□□□□□ -0.98
COL15A1P39059 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC8.91□□□□□ -0.98
COL15A1P39059 MIR4271-201ENST00000582451 67 ntBASIC8.91□□□□□ -0.98
COL15A1P39059 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
COL15A1P39059 AC068726.1-201ENST00000610993 341 ntBASIC8.91□□□□□ -0.98
COL15A1P39059 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC8.91□□□□□ -0.98
COL15A1P39059 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
COL15A1P39059 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
COL15A1P39059 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
COL15A1P39059 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
COL15A1P39059 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
COL15A1P39059 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
COL15A1P39059 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
COL15A1P39059 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC8.91□□□□□ -0.98
COL15A1P39059 AC131392.2-201ENST00000505635 4332 ntBASIC8.91□□□□□ -0.98
COL15A1P39059 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8.91□□□□□ -0.98
COL15A1P39059 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC8.91□□□□□ -0.98
COL15A1P39059 CDY7P-201ENST00000429883 1604 ntBASIC8.91□□□□□ -0.98
COL15A1P39059 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC8.9□□□□□ -0.98
COL15A1P39059 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC8.9□□□□□ -0.98
COL15A1P39059 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC8.9□□□□□ -0.98
COL15A1P39059 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
COL15A1P39059 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
COL15A1P39059 AC104964.2-201ENST00000562242 4641 ntBASIC8.9□□□□□ -0.98
COL15A1P39059 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
COL15A1P39059 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
COL15A1P39059 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
COL15A1P39059 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC8.9□□□□□ -0.98
COL15A1P39059 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC8.9□□□□□ -0.98
COL15A1P39059 FTH1P20-201ENST00000434913 548 ntBASIC8.9□□□□□ -0.98
COL15A1P39059 NPM1P23-201ENST00000440193 849 ntBASIC8.9□□□□□ -0.98
COL15A1P39059 RPS26P11-201ENST00000463445 348 ntBASIC8.9□□□□□ -0.98
COL15A1P39059 RPL34P34-201ENST00000465389 354 ntBASIC8.9□□□□□ -0.98
COL15A1P39059 RPS26P6-201ENST00000475156 348 ntBASIC8.9□□□□□ -0.98
COL15A1P39059 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC8.9□□□□□ -0.98
COL15A1P39059 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC8.9□□□□□ -0.98
COL15A1P39059 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC8.9□□□□□ -0.98
COL15A1P39059 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC8.9□□□□□ -0.98
COL15A1P39059 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC8.9□□□□□ -0.98
COL15A1P39059 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC8.9□□□□□ -0.98
COL15A1P39059 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC8.9□□□□□ -0.98
COL15A1P39059 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms