Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MED31-202ENST00000574128 619 ntTSL 3 BASIC7.5□□□□□ -1.21
APOEP02649 RN7SL657P-201ENST00000582431 293 ntBASIC7.5□□□□□ -1.21
APOEP02649 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.5□□□□□ -1.21
APOEP02649 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.5□□□□□ -1.21
APOEP02649 COX6CP16-201ENST00000603667 216 ntBASIC7.5□□□□□ -1.21
APOEP02649 FXYD6P1-201ENST00000604857 285 ntBASIC7.5□□□□□ -1.21
APOEP02649 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
APOEP02649 TSHZ2-205ENST00000626626 670 ntBASIC7.5□□□□□ -1.21
APOEP02649 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.5□□□□□ -1.21
APOEP02649 OR7E161P-202ENST00000641994 1033 ntBASIC7.5□□□□□ -1.21
APOEP02649 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
APOEP02649 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
APOEP02649 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.5□□□□□ -1.21
APOEP02649 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
APOEP02649 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
APOEP02649 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
APOEP02649 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
APOEP02649 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
APOEP02649 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
APOEP02649 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
APOEP02649 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.5□□□□□ -1.21
APOEP02649 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.5□□□□□ -1.21
APOEP02649 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.49□□□□□ -1.21
APOEP02649 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
APOEP02649 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.49□□□□□ -1.21
APOEP02649 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
APOEP02649 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
APOEP02649 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.49□□□□□ -1.21
APOEP02649 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.49□□□□□ -1.21
APOEP02649 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
APOEP02649 RNU6-1055P-201ENST00000391085 107 ntBASIC7.49□□□□□ -1.21
APOEP02649 FAUP2-201ENST00000394301 401 ntBASIC7.49□□□□□ -1.21
APOEP02649 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
APOEP02649 NPM1P31-201ENST00000399021 764 ntBASIC7.49□□□□□ -1.21
APOEP02649 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.49□□□□□ -1.21
APOEP02649 AC068138.1-201ENST00000412635 217 ntBASIC7.49□□□□□ -1.21
APOEP02649 FDPSP6-201ENST00000425091 512 ntBASIC7.49□□□□□ -1.21
APOEP02649 FECHP1-201ENST00000431896 1214 ntBASIC7.49□□□□□ -1.21
APOEP02649 ANXA2P2-201ENST00000435128 1020 ntBASIC7.49□□□□□ -1.21
APOEP02649 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC7.49□□□□□ -1.21
APOEP02649 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC7.49□□□□□ -1.21
APOEP02649 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC7.49□□□□□ -1.21
APOEP02649 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC7.49□□□□□ -1.21
APOEP02649 AC066616.1-201ENST00000486795 413 ntBASIC7.49□□□□□ -1.21
APOEP02649 RN7SL775P-201ENST00000498361 336 ntBASIC7.49□□□□□ -1.21
APOEP02649 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
APOEP02649 AC134698.1-201ENST00000511619 643 ntBASIC7.49□□□□□ -1.21
APOEP02649 AC027801.3-201ENST00000515049 698 ntBASIC7.49□□□□□ -1.21
APOEP02649 AP003084.1-201ENST00000524828 742 ntBASIC7.49□□□□□ -1.21
APOEP02649 OR7E161P-201ENST00000533722 967 ntBASIC7.49□□□□□ -1.21
APOEP02649 NF1P12-201ENST00000549593 583 ntBASIC7.49□□□□□ -1.21
APOEP02649 MIR4470-201ENST00000583453 72 ntBASIC7.49□□□□□ -1.21
APOEP02649 PRR13P5-201ENST00000596581 442 ntBASIC7.49□□□□□ -1.21
APOEP02649 AC012510.1-201ENST00000607946 759 ntBASIC7.49□□□□□ -1.21
APOEP02649 RPSAP68-201ENST00000625020 438 ntBASIC7.49□□□□□ -1.21
APOEP02649 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
APOEP02649 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.49□□□□□ -1.21
APOEP02649 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
APOEP02649 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.49□□□□□ -1.21
APOEP02649 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
APOEP02649 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
APOEP02649 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
APOEP02649 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
APOEP02649 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
APOEP02649 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.49□□□□□ -1.21
APOEP02649 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.49□□□□□ -1.21
APOEP02649 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
APOEP02649 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.49□□□□□ -1.21
APOEP02649 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
APOEP02649 AC034111.1-201ENST00000562143 3770 ntBASIC7.48□□□□□ -1.21
APOEP02649 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
APOEP02649 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
APOEP02649 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
APOEP02649 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
APOEP02649 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.48□□□□□ -1.21
APOEP02649 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
APOEP02649 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
APOEP02649 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.48□□□□□ -1.21
APOEP02649 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
APOEP02649 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
APOEP02649 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.48□□□□□ -1.21
APOEP02649 AC009237.4-201ENST00000441078 238 ntBASIC7.48□□□□□ -1.21
APOEP02649 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.48□□□□□ -1.21
APOEP02649 RPSAP7-201ENST00000456871 885 ntBASIC7.48□□□□□ -1.21
APOEP02649 TUBBP11-201ENST00000472255 252 ntBASIC7.48□□□□□ -1.21
APOEP02649 MYL6P4-201ENST00000477911 453 ntBASIC7.48□□□□□ -1.21
APOEP02649 RN7SL306P-201ENST00000492941 296 ntBASIC7.48□□□□□ -1.21
APOEP02649 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.48□□□□□ -1.21
APOEP02649 LINC01085-203ENST00000511195 326 ntBASIC7.48□□□□□ -1.21
APOEP02649 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.48□□□□□ -1.21
APOEP02649 IGKV1D-32-201ENST00000517449 318 ntBASIC7.48□□□□□ -1.21
APOEP02649 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC7.48□□□□□ -1.21
APOEP02649 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.48□□□□□ -1.21
APOEP02649 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.48□□□□□ -1.21
APOEP02649 AC103855.4-201ENST00000533158 265 ntBASIC7.48□□□□□ -1.21
APOEP02649 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.48□□□□□ -1.21
APOEP02649 AL031846.1-201ENST00000560933 314 ntBASIC7.48□□□□□ -1.21
APOEP02649 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC7.48□□□□□ -1.21
APOEP02649 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.48□□□□□ -1.21
APOEP02649 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms