Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 AC095038.1-201ENST00000429248 1591 ntBASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 AL096816.1-201ENST00000623300 2920 ntBASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.57□□□□□ -1.2
SYCE2Q6PIF2 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 OR8B9P-202ENST00000642028 5216 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 RN7SKP191-201ENST00000364713 306 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 RNU6-673P-201ENST00000365084 104 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 RNA5SP152-201ENST00000365184 110 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 RPL12P1-201ENST00000374520 498 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 RNA5SP176-201ENST00000390956 110 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 SPATA20P1-201ENST00000423089 438 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AL596268.1-201ENST00000427910 1048 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 Z83313.1-201ENST00000433780 718 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AL354714.5-201ENST00000450131 590 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 RN7SL153P-201ENST00000486501 292 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 RN7SL143P-201ENST00000496780 297 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AC137549.1-201ENST00000514243 533 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 RN7SKP70-201ENST00000516655 271 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 RN7SKP11-201ENST00000517018 287 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AC084851.2-201ENST00000530377 364 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AL132640.1-201ENST00000559594 619 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 OR4C49P-201ENST00000563891 900 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AL513548.2-201ENST00000602994 1207 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 RPS4XP21-201ENST00000603814 750 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 AC048344.4-201ENST00000619744 527 ntBASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
SYCE2Q6PIF2 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.55□□□□□ -1.2
SYCE2Q6PIF2 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYCE2Q6PIF2 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
SYCE2Q6PIF2 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC7.55□□□□□ -1.2
SYCE2Q6PIF2 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYCE2Q6PIF2 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.55□□□□□ -1.2
SYCE2Q6PIF2 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYCE2Q6PIF2 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.55□□□□□ -1.2
SYCE2Q6PIF2 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 236.4 ms