Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
PDS5AQ29RF7 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
PDS5AQ29RF7 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
PDS5AQ29RF7 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.46□□□□□ -1.05
PDS5AQ29RF7 AC009166.2-201ENST00000624410 2833 ntBASIC8.46□□□□□ -1.06
PDS5AQ29RF7 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 RN7SKP62-201ENST00000384539 329 ntBASIC8.46□□□□□ -1.06
PDS5AQ29RF7 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 PA2G4P1-201ENST00000442248 1197 ntBASIC8.46□□□□□ -1.06
PDS5AQ29RF7 SERPINA7P1-201ENST00000443077 631 ntBASIC8.46□□□□□ -1.06
PDS5AQ29RF7 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 RPS7P11-201ENST00000484240 586 ntBASIC8.46□□□□□ -1.06
PDS5AQ29RF7 AC021146.11-201ENST00000503319 491 ntBASIC8.46□□□□□ -1.06
PDS5AQ29RF7 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 AC137549.1-201ENST00000514243 533 ntBASIC8.46□□□□□ -1.06
PDS5AQ29RF7 AC113191.1-201ENST00000517759 403 ntBASIC8.46□□□□□ -1.06
PDS5AQ29RF7 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 AP005902.2-201ENST00000518393 307 ntBASIC8.46□□□□□ -1.06
PDS5AQ29RF7 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 AC010327.2-201ENST00000587647 488 ntBASIC8.46□□□□□ -1.06
PDS5AQ29RF7 AL121583.1-201ENST00000612444 682 ntBASIC8.46□□□□□ -1.06
PDS5AQ29RF7 MRPL57P3-201ENST00000619218 176 ntBASIC8.46□□□□□ -1.06
PDS5AQ29RF7 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 AC073857.1-201ENST00000625082 1054 ntBASIC8.46□□□□□ -1.06
PDS5AQ29RF7 Z82209.2-201ENST00000623410 2012 ntBASIC8.46□□□□□ -1.06
PDS5AQ29RF7 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 MAPK10-371ENST00000641952 5209 ntBASIC8.46□□□□□ -1.06
PDS5AQ29RF7 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 AL121949.2-201ENST00000403446 1548 ntBASIC8.46□□□□□ -1.06
PDS5AQ29RF7 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PDS5AQ29RF7 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 AL355974.1-201ENST00000618896 1708 ntBASIC8.45□□□□□ -1.06
PDS5AQ29RF7 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 RNA5SP382-201ENST00000363355 112 ntBASIC8.45□□□□□ -1.06
PDS5AQ29RF7 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 FAM183DP-201ENST00000421987 399 ntBASIC8.45□□□□□ -1.06
PDS5AQ29RF7 AHCYP8-201ENST00000425108 209 ntBASIC8.45□□□□□ -1.06
PDS5AQ29RF7 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 PPIAP32-201ENST00000449940 472 ntBASIC8.45□□□□□ -1.06
PDS5AQ29RF7 NPM1P9-201ENST00000453156 844 ntBASIC8.45□□□□□ -1.06
PDS5AQ29RF7 NMNAT1P3-201ENST00000457517 888 ntBASIC8.45□□□□□ -1.06
PDS5AQ29RF7 RPS26P11-201ENST00000463445 348 ntBASIC8.45□□□□□ -1.06
PDS5AQ29RF7 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 RPS26P6-201ENST00000475156 348 ntBASIC8.45□□□□□ -1.06
PDS5AQ29RF7 RN7SL836P-201ENST00000476140 296 ntBASIC8.45□□□□□ -1.06
PDS5AQ29RF7 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 MTCYBP44-201ENST00000514835 823 ntBASIC8.45□□□□□ -1.06
PDS5AQ29RF7 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 RNA5SP278-201ENST00000517055 102 ntBASIC8.45□□□□□ -1.06
PDS5AQ29RF7 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 AC087752.2-201ENST00000521219 281 ntBASIC8.45□□□□□ -1.06
PDS5AQ29RF7 AC007537.1-201ENST00000539347 327 ntBASIC8.45□□□□□ -1.06
PDS5AQ29RF7 AC010287.1-201ENST00000566916 357 ntBASIC8.45□□□□□ -1.06
PDS5AQ29RF7 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 AC068408.1-201ENST00000577406 1144 ntBASIC8.45□□□□□ -1.06
PDS5AQ29RF7 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 AP005329.3-201ENST00000609924 686 ntBASIC8.45□□□□□ -1.06
PDS5AQ29RF7 AP005212.3-201ENST00000619964 528 ntBASIC8.45□□□□□ -1.06
PDS5AQ29RF7 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PDS5AQ29RF7 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PDS5AQ29RF7 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
PDS5AQ29RF7 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PDS5AQ29RF7 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.44□□□□□ -1.06
PDS5AQ29RF7 OGFOD1P1-201ENST00000447552 1592 ntBASIC8.44□□□□□ -1.06
PDS5AQ29RF7 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC8.44□□□□□ -1.06
PDS5AQ29RF7 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.44□□□□□ -1.06
PDS5AQ29RF7 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
PDS5AQ29RF7 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PDS5AQ29RF7 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms