Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RB1P06400 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RB1P06400 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.64□□□□□ -1.19
RB1P06400 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.64□□□□□ -1.19
RB1P06400 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
RB1P06400 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
RB1P06400 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC7.64□□□□□ -1.19
RB1P06400 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RB1P06400 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RB1P06400 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.64□□□□□ -1.19
RB1P06400 TDGF1P3-202ENST00000602699 2710 ntBASIC7.64□□□□□ -1.19
RB1P06400 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RB1P06400 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.64□□□□□ -1.19
RB1P06400 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.64□□□□□ -1.19
RB1P06400 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
RB1P06400 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RB1P06400 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
RB1P06400 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.63□□□□□ -1.19
RB1P06400 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RB1P06400 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RB1P06400 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RB1P06400 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
RB1P06400 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RB1P06400 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RB1P06400 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RB1P06400 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RB1P06400 PPIAP22-201ENST00000358455 498 ntBASIC7.63□□□□□ -1.19
RB1P06400 RN7SKP189-201ENST00000365042 330 ntBASIC7.63□□□□□ -1.19
RB1P06400 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RB1P06400 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.63□□□□□ -1.19
RB1P06400 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.63□□□□□ -1.19
RB1P06400 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC7.63□□□□□ -1.19
RB1P06400 CHCHD3P1-201ENST00000425516 676 ntBASIC7.63□□□□□ -1.19
RB1P06400 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.63□□□□□ -1.19
RB1P06400 TIMM8BP2-201ENST00000445940 251 ntBASIC7.63□□□□□ -1.19
RB1P06400 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.63□□□□□ -1.19
RB1P06400 RHEBP1-201ENST00000448647 556 ntBASIC7.63□□□□□ -1.19
RB1P06400 CCNJP1-201ENST00000450600 1149 ntBASIC7.63□□□□□ -1.19
RB1P06400 RNA5SP318-201ENST00000516352 92 ntBASIC7.63□□□□□ -1.19
RB1P06400 RNA5SP287-201ENST00000516358 103 ntBASIC7.63□□□□□ -1.19
RB1P06400 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC7.63□□□□□ -1.19
RB1P06400 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.63□□□□□ -1.19
RB1P06400 MIR212-201ENST00000586026 110 ntBASIC7.63□□□□□ -1.19
RB1P06400 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
RB1P06400 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.63□□□□□ -1.19
RB1P06400 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.63□□□□□ -1.19
RB1P06400 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC7.63□□□□□ -1.19
RB1P06400 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RB1P06400 MIR6823-201ENST00000622118 61 ntBASIC7.63□□□□□ -1.19
RB1P06400 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.63□□□□□ -1.19
RB1P06400 MAPK10-281ENST00000641170 3070 ntBASIC7.63□□□□□ -1.19
RB1P06400 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
RB1P06400 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC7.63□□□□□ -1.19
RB1P06400 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.63□□□□□ -1.19
RB1P06400 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
RB1P06400 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.63□□□□□ -1.19
RB1P06400 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RB1P06400 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RB1P06400 XKRY2-202ENST00000623874 1581 ntBASIC7.63□□□□□ -1.19
RB1P06400 XKRY-202ENST00000624960 1581 ntBASIC7.63□□□□□ -1.19
RB1P06400 RPS2P45-201ENST00000469997 2057 ntBASIC7.63□□□□□ -1.19
RB1P06400 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.62□□□□□ -1.19
RB1P06400 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RB1P06400 AL353807.3-201ENST00000500626 2505 ntBASIC7.62□□□□□ -1.19
RB1P06400 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.62□□□□□ -1.19
RB1P06400 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RB1P06400 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.62□□□□□ -1.19
RB1P06400 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RB1P06400 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RB1P06400 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC7.62□□□□□ -1.19
RB1P06400 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RB1P06400 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RB1P06400 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.62□□□□□ -1.19
RB1P06400 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
RB1P06400 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RB1P06400 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
RB1P06400 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.62□□□□□ -1.19
RB1P06400 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.62□□□□□ -1.19
RB1P06400 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RB1P06400 OR52K3P-202ENST00000641797 1729 ntBASIC7.62□□□□□ -1.19
RB1P06400 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RB1P06400 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RB1P06400 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
RB1P06400 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RB1P06400 RNA5SP155-201ENST00000411154 129 ntBASIC7.62□□□□□ -1.19
RB1P06400 AL359885.1-201ENST00000415786 903 ntBASIC7.62□□□□□ -1.19
RB1P06400 RAC1P4-201ENST00000419413 579 ntBASIC7.62□□□□□ -1.19
RB1P06400 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.62□□□□□ -1.19
RB1P06400 RN7SL751P-201ENST00000473281 284 ntBASIC7.62□□□□□ -1.19
RB1P06400 AC008967.1-201ENST00000504843 163 ntBASIC7.62□□□□□ -1.19
RB1P06400 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.62□□□□□ -1.19
RB1P06400 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.62□□□□□ -1.19
RB1P06400 AC093878.1-201ENST00000515630 432 ntBASIC7.62□□□□□ -1.19
RB1P06400 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.62□□□□□ -1.19
RB1P06400 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.62□□□□□ -1.19
RB1P06400 AC079866.1-201ENST00000534985 1220 ntBASIC7.62□□□□□ -1.19
RB1P06400 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.62□□□□□ -1.19
RB1P06400 AL356800.1-201ENST00000553339 735 ntBASIC7.62□□□□□ -1.19
RB1P06400 AC121758.1-202ENST00000556917 658 ntBASIC7.62□□□□□ -1.19
RB1P06400 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms