Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 CROCCP5-201ENST00000436658 830 ntBASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 AC093787.1-201ENST00000450396 207 ntBASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 AL050303.2-201ENST00000619798 666 ntBASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DRB4X5D2U9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 AC105036.2-201ENST00000569468 176 ntBASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DRB4X5D2U9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 MKRN4P-201ENST00000444706 1521 ntBASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 AL355472.2-201ENST00000422958 438 ntBASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 AC018445.3-201ENST00000624177 1945 ntBASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DRB4X5D2U9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DRB4X5D2U9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DRB4X5D2U9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DRB4X5D2U9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DRB4X5D2U9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DRB4X5D2U9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DRB4X5D2U9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DRB4X5D2U9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HLA-DRB4X5D2U9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DRB4X5D2U9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DRB4X5D2U9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DRB4X5D2U9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DRB4X5D2U9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms