Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 AC073314.1-201ENST00000568729 2216 ntBASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPH3AQ9Y2J0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RPH3AQ9Y2J0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
RPH3AQ9Y2J0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RPH3AQ9Y2J0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RPH3AQ9Y2J0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.27■□□□□ 0.51
RPH3AQ9Y2J0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 AC006557.6-201ENST00000623071 864 ntBASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 AP006294.2-201ENST00000641667 209 ntBASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 LINC01006-201ENST00000333319 2292 ntBASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RPH3AQ9Y2J0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 UNC93B5-201ENST00000530315 699 ntBASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 SOX15-203ENST00000570788 1093 ntBASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 AC020907.5-201ENST00000624372 1936 ntBASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPH3AQ9Y2J0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 ESRRAP1-201ENST00000400596 1257 ntBASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms