Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.32■□□□□ 0.52
KRCC1Q9NPI7 MYCNOS-205ENST00000641950 531 ntBASIC18.32■□□□□ 0.52
KRCC1Q9NPI7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRCC1Q9NPI7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
KRCC1Q9NPI7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRCC1Q9NPI7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.32■□□□□ 0.52
KRCC1Q9NPI7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.32■□□□□ 0.52
KRCC1Q9NPI7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRCC1Q9NPI7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRCC1Q9NPI7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRCC1Q9NPI7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.32■□□□□ 0.52
KRCC1Q9NPI7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRCC1Q9NPI7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRCC1Q9NPI7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 UBE2DNL-204ENST00000602536 740 ntBASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.31■□□□□ 0.52
KRCC1Q9NPI7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 AL591742.1-201ENST00000604433 565 ntBASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.3■□□□□ 0.52
KRCC1Q9NPI7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRCC1Q9NPI7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
KRCC1Q9NPI7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRCC1Q9NPI7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRCC1Q9NPI7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.29■□□□□ 0.52
KRCC1Q9NPI7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.29■□□□□ 0.52
KRCC1Q9NPI7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRCC1Q9NPI7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRCC1Q9NPI7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRCC1Q9NPI7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.29■□□□□ 0.52
KRCC1Q9NPI7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.29■□□□□ 0.52
KRCC1Q9NPI7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRCC1Q9NPI7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
KRCC1Q9NPI7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRCC1Q9NPI7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
KRCC1Q9NPI7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 AL162412.1-201ENST00000567129 965 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms