Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
HIPK3Q9H422 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
HIPK3Q9H422 AL031985.4-201ENST00000642138 673 ntBASIC21.93■■□□□ 1.1
HIPK3Q9H422 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
HIPK3Q9H422 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
HIPK3Q9H422 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIPK3Q9H422 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIPK3Q9H422 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HIPK3Q9H422 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIPK3Q9H422 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIPK3Q9H422 ATP5G1P1-201ENST00000448724 379 ntBASIC21.92■■□□□ 1.1
HIPK3Q9H422 WWOX-216ENST00000569818 525 ntBASIC21.92■■□□□ 1.1
HIPK3Q9H422 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.92■■□□□ 1.1
HIPK3Q9H422 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.92■■□□□ 1.1
HIPK3Q9H422 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIPK3Q9H422 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.92■■□□□ 1.1
HIPK3Q9H422 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK3Q9H422 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK3Q9H422 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK3Q9H422 PTBP1P-201ENST00000554374 1601 ntBASIC21.91■■□□□ 1.1
HIPK3Q9H422 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK3Q9H422 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK3Q9H422 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK3Q9H422 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK3Q9H422 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK3Q9H422 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK3Q9H422 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.91■■□□□ 1.1
HIPK3Q9H422 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.91■■□□□ 1.1
HIPK3Q9H422 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK3Q9H422 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
HIPK3Q9H422 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.91■■□□□ 1.1
HIPK3Q9H422 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.91■■□□□ 1.1
HIPK3Q9H422 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.91■■□□□ 1.1
HIPK3Q9H422 C2orf69P3-201ENST00000565542 1120 ntBASIC21.91■■□□□ 1.1
HIPK3Q9H422 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.91■■□□□ 1.1
HIPK3Q9H422 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
HIPK3Q9H422 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
HIPK3Q9H422 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK3Q9H422 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.91■■□□□ 1.1
HIPK3Q9H422 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
HIPK3Q9H422 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK3Q9H422 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
HIPK3Q9H422 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK3Q9H422 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK3Q9H422 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK3Q9H422 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK3Q9H422 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK3Q9H422 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
HIPK3Q9H422 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.9■■□□□ 1.1
HIPK3Q9H422 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK3Q9H422 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.9■■□□□ 1.1
HIPK3Q9H422 AC006011.2-201ENST00000621313 1158 ntBASIC21.9■■□□□ 1.1
HIPK3Q9H422 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
HIPK3Q9H422 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK3Q9H422 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK3Q9H422 FSCN1P1-201ENST00000568912 1481 ntBASIC21.9■■□□□ 1.1
HIPK3Q9H422 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK3Q9H422 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HIPK3Q9H422 KRT8P20-201ENST00000423953 1409 ntBASIC21.89■■□□□ 1.1
HIPK3Q9H422 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
HIPK3Q9H422 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
HIPK3Q9H422 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HIPK3Q9H422 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
HIPK3Q9H422 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
HIPK3Q9H422 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.89■■□□□ 1.09
HIPK3Q9H422 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HIPK3Q9H422 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.89■■□□□ 1.09
HIPK3Q9H422 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIPK3Q9H422 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HIPK3Q9H422 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.88■■□□□ 1.09
HIPK3Q9H422 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.88■■□□□ 1.09
HIPK3Q9H422 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIPK3Q9H422 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIPK3Q9H422 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.88■■□□□ 1.09
HIPK3Q9H422 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
HIPK3Q9H422 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIPK3Q9H422 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HIPK3Q9H422 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.88■■□□□ 1.09
HIPK3Q9H422 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIPK3Q9H422 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.88■■□□□ 1.09
HIPK3Q9H422 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIPK3Q9H422 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HIPK3Q9H422 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.88■■□□□ 1.09
HIPK3Q9H422 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HIPK3Q9H422 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.88■■□□□ 1.09
HIPK3Q9H422 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK3Q9H422 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
HIPK3Q9H422 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK3Q9H422 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK3Q9H422 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK3Q9H422 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK3Q9H422 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK3Q9H422 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK3Q9H422 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK3Q9H422 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK3Q9H422 MESTP1-201ENST00000404287 994 ntBASIC21.87■■□□□ 1.09
HIPK3Q9H422 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK3Q9H422 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.87■■□□□ 1.09
HIPK3Q9H422 AC026271.3-201ENST00000571884 352 ntBASIC21.87■■□□□ 1.09
HIPK3Q9H422 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms