Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TRAF4Q9BUZ4 AC091874.3-201ENST00000512672 1195 ntBASIC17.81■□□□□ 0.44
TRAF4Q9BUZ4 AC066615.1-201ENST00000640911 628 ntBASIC17.81■□□□□ 0.44
TRAF4Q9BUZ4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF4Q9BUZ4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF4Q9BUZ4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF4Q9BUZ4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRAF4Q9BUZ4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF4Q9BUZ4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF4Q9BUZ4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF4Q9BUZ4 PCDHAC2-203ENST00000615316 3011 ntBASIC17.81■□□□□ 0.44
TRAF4Q9BUZ4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRAF4Q9BUZ4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF4Q9BUZ4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF4Q9BUZ4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 AC245052.3-201ENST00000450182 901 ntBASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 ITM2C-210ENST00000620962 501 ntBASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF4Q9BUZ4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 AC091799.1-201ENST00000422823 811 ntBASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 DUSP5P2-201ENST00000426873 1033 ntBASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 AC006128.1-201ENST00000624704 1661 ntBASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRAF4Q9BUZ4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 FAM21FP-204ENST00000608637 956 ntBASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 AC026471.6-201ENST00000622954 1905 ntBASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF4Q9BUZ4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 AL162377.1-201ENST00000618844 1793 ntBASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 KRT18P29-201ENST00000397031 1267 ntBASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAF4Q9BUZ4 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms