Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 AFG3L1P-217ENST00000557444 2447 ntBASIC17.3■□□□□ 0.36
CPNE2Q96FN4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 MYCNOS-205ENST00000641950 531 ntBASIC17.3■□□□□ 0.36
CPNE2Q96FN4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CPNE2Q96FN4 AC087633.2-202ENST00000565166 1439 ntBASIC17.3■□□□□ 0.36
CPNE2Q96FN4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 AC112907.3-201ENST00000577781 2400 ntBASIC17.29■□□□□ 0.36
CPNE2Q96FN4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE2Q96FN4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 KRT18P11-201ENST00000435214 1283 ntBASIC17.28■□□□□ 0.36
CPNE2Q96FN4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 AL162412.1-201ENST00000567129 965 ntBASIC17.28■□□□□ 0.36
CPNE2Q96FN4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 AL591742.1-201ENST00000604433 565 ntBASIC17.28■□□□□ 0.36
CPNE2Q96FN4 AL356652.1-201ENST00000615962 565 ntBASIC17.28■□□□□ 0.36
CPNE2Q96FN4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 TMEM179-206ENST00000616017 1645 ntBASIC17.28■□□□□ 0.36
CPNE2Q96FN4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE2Q96FN4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE2Q96FN4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE2Q96FN4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE2Q96FN4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.27■□□□□ 0.36
CPNE2Q96FN4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE2Q96FN4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE2Q96FN4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE2Q96FN4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE2Q96FN4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE2Q96FN4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.27■□□□□ 0.36
CPNE2Q96FN4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.27■□□□□ 0.36
CPNE2Q96FN4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.27■□□□□ 0.36
CPNE2Q96FN4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE2Q96FN4 UBE2DNL-204ENST00000602536 740 ntBASIC17.27■□□□□ 0.36
CPNE2Q96FN4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE2Q96FN4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.27■□□□□ 0.36
CPNE2Q96FN4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms