Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TUBGCP3Q96CW5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TUBGCP3Q96CW5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TUBGCP3Q96CW5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.37■□□□□ 0.69
TUBGCP3Q96CW5 MYCNOS-205ENST00000641950 531 ntBASIC19.37■□□□□ 0.69
TUBGCP3Q96CW5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TUBGCP3Q96CW5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TUBGCP3Q96CW5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.37■□□□□ 0.69
TUBGCP3Q96CW5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 AC087633.2-202ENST00000565166 1439 ntBASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TUBGCP3Q96CW5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TUBGCP3Q96CW5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
TUBGCP3Q96CW5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TUBGCP3Q96CW5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TUBGCP3Q96CW5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.35■□□□□ 0.69
TUBGCP3Q96CW5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TUBGCP3Q96CW5 KRT18P61-201ENST00000585825 1298 ntBASIC19.35■□□□□ 0.69
TUBGCP3Q96CW5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.35■□□□□ 0.69
TUBGCP3Q96CW5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.35■□□□□ 0.69
TUBGCP3Q96CW5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.35■□□□□ 0.69
TUBGCP3Q96CW5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TUBGCP3Q96CW5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TUBGCP3Q96CW5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.35■□□□□ 0.69
TUBGCP3Q96CW5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TUBGCP3Q96CW5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TUBGCP3Q96CW5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TUBGCP3Q96CW5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TUBGCP3Q96CW5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.35■□□□□ 0.69
TUBGCP3Q96CW5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 AC018445.3-201ENST00000624177 1945 ntBASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.34■□□□□ 0.69
TUBGCP3Q96CW5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.33■□□□□ 0.69
TUBGCP3Q96CW5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.33■□□□□ 0.69
TUBGCP3Q96CW5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TUBGCP3Q96CW5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TUBGCP3Q96CW5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TUBGCP3Q96CW5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TUBGCP3Q96CW5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TUBGCP3Q96CW5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.33■□□□□ 0.69
TUBGCP3Q96CW5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
TUBGCP3Q96CW5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TUBGCP3Q96CW5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TUBGCP3Q96CW5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TUBGCP3Q96CW5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.33■□□□□ 0.68
TUBGCP3Q96CW5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
TUBGCP3Q96CW5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.33■□□□□ 0.68
TUBGCP3Q96CW5 AL591742.1-201ENST00000604433 565 ntBASIC19.33■□□□□ 0.68
TUBGCP3Q96CW5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TUBGCP3Q96CW5 AC120498.9-201ENST00000339021 3867 ntBASIC19.33■□□□□ 0.68
TUBGCP3Q96CW5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TUBGCP3Q96CW5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TUBGCP3Q96CW5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TUBGCP3Q96CW5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TUBGCP3Q96CW5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TUBGCP3Q96CW5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TUBGCP3Q96CW5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TUBGCP3Q96CW5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms