Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 DUSP5P2-201ENST00000426873 1033 ntBASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIMC1Q8NDZ2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIMC1Q8NDZ2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIMC1Q8NDZ2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIMC1Q8NDZ2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.79■□□□□ 0.6
SIMC1Q8NDZ2 C2orf69P4-201ENST00000565394 541 ntBASIC18.79■□□□□ 0.6
SIMC1Q8NDZ2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.79■□□□□ 0.6
SIMC1Q8NDZ2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIMC1Q8NDZ2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIMC1Q8NDZ2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIMC1Q8NDZ2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SIMC1Q8NDZ2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIMC1Q8NDZ2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 AC092118.2-201ENST00000613495 667 ntBASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SIMC1Q8NDZ2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 AFG3L1P-217ENST00000557444 2447 ntBASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.77■□□□□ 0.6
SIMC1Q8NDZ2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.77■□□□□ 0.59
SIMC1Q8NDZ2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.77■□□□□ 0.59
SIMC1Q8NDZ2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.77■□□□□ 0.59
SIMC1Q8NDZ2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SIMC1Q8NDZ2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.77■□□□□ 0.59
SIMC1Q8NDZ2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms