Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 MYC-209ENST00000641252 345 ntBASIC19.62■□□□□ 0.73
SYVN1Q86TM6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYVN1Q86TM6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 KRT18P29-201ENST00000397031 1267 ntBASIC19.61■□□□□ 0.73
SYVN1Q86TM6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYVN1Q86TM6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 AC007952.6-201ENST00000573168 2673 ntBASIC19.6■□□□□ 0.73
SYVN1Q86TM6 AC003957.1-201ENST00000625108 2673 ntBASIC19.6■□□□□ 0.73
SYVN1Q86TM6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 AC091874.3-201ENST00000512672 1195 ntBASIC19.6■□□□□ 0.73
SYVN1Q86TM6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 AC083880.1-201ENST00000608266 535 ntBASIC19.6■□□□□ 0.73
SYVN1Q86TM6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.6■□□□□ 0.73
SYVN1Q86TM6 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.6■□□□□ 0.73
SYVN1Q86TM6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYVN1Q86TM6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SYVN1Q86TM6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYVN1Q86TM6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYVN1Q86TM6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYVN1Q86TM6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SYVN1Q86TM6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYVN1Q86TM6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.59■□□□□ 0.73
SYVN1Q86TM6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SYVN1Q86TM6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYVN1Q86TM6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
SYVN1Q86TM6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.59■□□□□ 0.73
SYVN1Q86TM6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.59■□□□□ 0.73
SYVN1Q86TM6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYVN1Q86TM6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms