Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SWSAP1Q6NVH7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 AL596275.1-201ENST00000423464 877 ntBASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 AL121906.2-201ENST00000621597 723 ntBASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.29■■□□□ 1.16
SWSAP1Q6NVH7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SWSAP1Q6NVH7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SWSAP1Q6NVH7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.28■■□□□ 1.16
SWSAP1Q6NVH7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SWSAP1Q6NVH7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
SWSAP1Q6NVH7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.28■■□□□ 1.16
SWSAP1Q6NVH7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SWSAP1Q6NVH7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SWSAP1Q6NVH7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SWSAP1Q6NVH7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.28■■□□□ 1.16
SWSAP1Q6NVH7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.28■■□□□ 1.16
SWSAP1Q6NVH7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SWSAP1Q6NVH7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 AC073314.1-201ENST00000568729 2216 ntBASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 AC020907.5-201ENST00000624372 1936 ntBASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SWSAP1Q6NVH7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 MIR718-201ENST00000390190 70 ntBASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SWSAP1Q6NVH7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SWSAP1Q6NVH7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SWSAP1Q6NVH7 KRT16P6-202ENST00000425692 1426 ntBASIC22.25■■□□□ 1.15
SWSAP1Q6NVH7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SWSAP1Q6NVH7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.25■■□□□ 1.15
SWSAP1Q6NVH7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.25■■□□□ 1.15
SWSAP1Q6NVH7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.25■■□□□ 1.15
SWSAP1Q6NVH7 NBPF21P-201ENST00000425093 1451 ntBASIC22.25■■□□□ 1.15
SWSAP1Q6NVH7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SWSAP1Q6NVH7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SWSAP1Q6NVH7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.25■■□□□ 1.15
SWSAP1Q6NVH7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SWSAP1Q6NVH7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
SWSAP1Q6NVH7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SWSAP1Q6NVH7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SWSAP1Q6NVH7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.25■■□□□ 1.15
SWSAP1Q6NVH7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SWSAP1Q6NVH7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SWSAP1Q6NVH7 CLDN5-201ENST00000403084 2357 ntBASIC22.24■■□□□ 1.15
SWSAP1Q6NVH7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SWSAP1Q6NVH7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SWSAP1Q6NVH7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SWSAP1Q6NVH7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
SWSAP1Q6NVH7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.24■■□□□ 1.15
SWSAP1Q6NVH7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms