Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4BQ5SQS7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.74■□□□□ 0.75
SH2D4BQ5SQS7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.74■□□□□ 0.75
SH2D4BQ5SQS7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SH2D4BQ5SQS7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4BQ5SQS7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4BQ5SQS7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
SH2D4BQ5SQS7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.74■□□□□ 0.75
SH2D4BQ5SQS7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
SH2D4BQ5SQS7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4BQ5SQS7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4BQ5SQS7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4BQ5SQS7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4BQ5SQS7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.74■□□□□ 0.75
SH2D4BQ5SQS7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4BQ5SQS7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.74■□□□□ 0.75
SH2D4BQ5SQS7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SH2D4BQ5SQS7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH2D4BQ5SQS7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH2D4BQ5SQS7 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.72■□□□□ 0.75
SH2D4BQ5SQS7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH2D4BQ5SQS7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH2D4BQ5SQS7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH2D4BQ5SQS7 KRT8P36-201ENST00000489121 1440 ntBASIC19.72■□□□□ 0.75
SH2D4BQ5SQS7 CCDC92B-201ENST00000575506 885 ntBASIC19.72■□□□□ 0.75
SH2D4BQ5SQS7 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.72■□□□□ 0.75
SH2D4BQ5SQS7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.72■□□□□ 0.75
SH2D4BQ5SQS7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SH2D4BQ5SQS7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.72■□□□□ 0.75
SH2D4BQ5SQS7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH2D4BQ5SQS7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH2D4BQ5SQS7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.72■□□□□ 0.75
SH2D4BQ5SQS7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 AC091799.1-201ENST00000422823 811 ntBASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.71■□□□□ 0.75
SH2D4BQ5SQS7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SH2D4BQ5SQS7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.7■□□□□ 0.74
SH2D4BQ5SQS7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SH2D4BQ5SQS7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SH2D4BQ5SQS7 AL691432.2-201ENST00000607222 2038 ntBASIC19.7■□□□□ 0.74
SH2D4BQ5SQS7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SH2D4BQ5SQS7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.7■□□□□ 0.74
SH2D4BQ5SQS7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH2D4BQ5SQS7 AC007322.3-201ENST00000426526 701 ntBASIC19.7■□□□□ 0.74
SH2D4BQ5SQS7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.7■□□□□ 0.74
SH2D4BQ5SQS7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.7■□□□□ 0.74
SH2D4BQ5SQS7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH2D4BQ5SQS7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SH2D4BQ5SQS7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
SH2D4BQ5SQS7 AC018445.3-201ENST00000624177 1945 ntBASIC19.7■□□□□ 0.74
SH2D4BQ5SQS7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms