Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FREM1Q5H8C1 AC012618.2-201ENST00000428058 849 ntBASIC17.62■□□□□ 0.41
FREM1Q5H8C1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FREM1Q5H8C1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.62■□□□□ 0.41
FREM1Q5H8C1 AC133681.1-201ENST00000465482 601 ntBASIC17.62■□□□□ 0.41
FREM1Q5H8C1 RPPH1-201ENST00000516869 333 ntBASIC17.62■□□□□ 0.41
FREM1Q5H8C1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
FREM1Q5H8C1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FREM1Q5H8C1 AL031963.3-201ENST00000606441 850 ntBASIC17.62■□□□□ 0.41
FREM1Q5H8C1 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.62■□□□□ 0.41
FREM1Q5H8C1 AL359736.2-201ENST00000621992 437 ntBASIC17.62■□□□□ 0.41
FREM1Q5H8C1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
FREM1Q5H8C1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FREM1Q5H8C1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
FREM1Q5H8C1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FREM1Q5H8C1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FREM1Q5H8C1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
FREM1Q5H8C1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.61■□□□□ 0.41
FREM1Q5H8C1 KRT8P17-201ENST00000453110 1448 ntBASIC17.61■□□□□ 0.41
FREM1Q5H8C1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FREM1Q5H8C1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.61■□□□□ 0.41
FREM1Q5H8C1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FREM1Q5H8C1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FREM1Q5H8C1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.61■□□□□ 0.41
FREM1Q5H8C1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
FREM1Q5H8C1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.61■□□□□ 0.41
FREM1Q5H8C1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FREM1Q5H8C1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
FREM1Q5H8C1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
FREM1Q5H8C1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FREM1Q5H8C1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
FREM1Q5H8C1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 AC124016.1-201ENST00000609552 612 ntBASIC17.6■□□□□ 0.41
FREM1Q5H8C1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 AL390719.1-204ENST00000412397 1219 ntBASIC17.6■□□□□ 0.41
FREM1Q5H8C1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 FAM197Y4-202ENST00000622692 608 ntBASIC17.6■□□□□ 0.41
FREM1Q5H8C1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FREM1Q5H8C1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 UNC93B4-201ENST00000505679 747 ntBASIC17.59■□□□□ 0.41
FREM1Q5H8C1 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 AL023875.1-201ENST00000640777 796 ntBASIC17.59■□□□□ 0.41
FREM1Q5H8C1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FREM1Q5H8C1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
FREM1Q5H8C1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
FREM1Q5H8C1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
FREM1Q5H8C1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.58■□□□□ 0.41
FREM1Q5H8C1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
FREM1Q5H8C1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FREM1Q5H8C1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FREM1Q5H8C1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
FREM1Q5H8C1 AC239809.2-201ENST00000415381 517 ntBASIC17.58■□□□□ 0.4
FREM1Q5H8C1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FREM1Q5H8C1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FREM1Q5H8C1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FREM1Q5H8C1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
FREM1Q5H8C1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FREM1Q5H8C1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms