Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC24.07■■□□□ 1.44
PDS5AQ29RF7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC24.07■■□□□ 1.44
PDS5AQ29RF7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC24.07■■□□□ 1.44
PDS5AQ29RF7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC24.07■■□□□ 1.44
PDS5AQ29RF7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC24.07■■□□□ 1.44
PDS5AQ29RF7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.07■■□□□ 1.44
PDS5AQ29RF7 HTR7P1-201ENST00000538670 1336 ntBASIC24.07■■□□□ 1.44
PDS5AQ29RF7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 MIR4785-201ENST00000585005 73 ntBASIC24.06■■□□□ 1.44
PDS5AQ29RF7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PDS5AQ29RF7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PDS5AQ29RF7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
PDS5AQ29RF7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC24.05■■□□□ 1.44
PDS5AQ29RF7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PDS5AQ29RF7 KRT17P2-201ENST00000300992 1314 ntBASIC24.05■■□□□ 1.44
PDS5AQ29RF7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
PDS5AQ29RF7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
PDS5AQ29RF7 TSPY7P-201ENST00000431358 1114 ntBASIC24.05■■□□□ 1.44
PDS5AQ29RF7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PDS5AQ29RF7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC24.05■■□□□ 1.44
PDS5AQ29RF7 TFP1-202ENST00000475455 1573 ntBASIC24.05■■□□□ 1.44
PDS5AQ29RF7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC24.05■■□□□ 1.44
PDS5AQ29RF7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
PDS5AQ29RF7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC24.05■■□□□ 1.44
PDS5AQ29RF7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PDS5AQ29RF7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC24.05■■□□□ 1.44
PDS5AQ29RF7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC24.05■■□□□ 1.44
PDS5AQ29RF7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC24.05■■□□□ 1.44
PDS5AQ29RF7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PDS5AQ29RF7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC24.05■■□□□ 1.44
PDS5AQ29RF7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
PDS5AQ29RF7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.03■■□□□ 1.44
PDS5AQ29RF7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
PDS5AQ29RF7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PDS5AQ29RF7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
PDS5AQ29RF7 AC007375.3-201ENST00000600936 2314 ntBASIC24.03■■□□□ 1.44
PDS5AQ29RF7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
PDS5AQ29RF7 SAPCD2P4-201ENST00000424595 1171 ntBASIC24.03■■□□□ 1.44
PDS5AQ29RF7 PENK-204ENST00000518770 863 ntTSL 2 BASIC24.03■■□□□ 1.44
PDS5AQ29RF7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC24.03■■□□□ 1.44
PDS5AQ29RF7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC24.03■■□□□ 1.44
PDS5AQ29RF7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PDS5AQ29RF7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PDS5AQ29RF7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PDS5AQ29RF7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PDS5AQ29RF7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PDS5AQ29RF7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PDS5AQ29RF7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PDS5AQ29RF7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
PDS5AQ29RF7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PDS5AQ29RF7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
PDS5AQ29RF7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC24.02■■□□□ 1.44
PDS5AQ29RF7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC24.02■■□□□ 1.44
PDS5AQ29RF7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC24.02■■□□□ 1.44
PDS5AQ29RF7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC24.02■■□□□ 1.44
PDS5AQ29RF7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PDS5AQ29RF7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
PDS5AQ29RF7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PDS5AQ29RF7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC24.01■■□□□ 1.43
PDS5AQ29RF7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC24.01■■□□□ 1.43
PDS5AQ29RF7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
PDS5AQ29RF7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PDS5AQ29RF7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms