Protein–RNA interactions for Protein: Q03390

VPS60, Vacuolar protein-sorting-associated protein 60, yeastyeast

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS60Q03390 YOL013W-AYOL013W-A 192 nt0.18□□□□□ -2.38
VPS60Q03390 YPR197CYPR197C 564 nt0.18□□□□□ -2.38
VPS60Q03390 NIP1YMR309C 2439 nt0.17□□□□□ -2.38
VPS60Q03390 YFL063WYFL063W 456 nt0.17□□□□□ -2.38
VPS60Q03390 YLL019W-AYLL019W-A 93 nt0.17□□□□□ -2.38
VPS60Q03390 RCO1YMR075W 2055 nt0.17□□□□□ -2.38
VPS60Q03390 ESP1YGR098C 4893 nt0.16□□□□□ -2.38
VPS60Q03390 MLP2YIL149C 5040 nt0.16□□□□□ -2.38
VPS60Q03390 YDR183C-AYDR183C-A 258 nt0.16□□□□□ -2.38
VPS60Q03390 YER078W-AYER078W-A 165 nt0.16□□□□□ -2.38
VPS60Q03390 YKL100W-AYKL100W-A 90 nt0.16□□□□□ -2.38
VPS60Q03390 YGL149WYGL149W 306 nt0.15□□□□□ -2.39
VPS60Q03390 snR36snR36 182 nt0.15□□□□□ -2.39
VPS60Q03390 YLL006W-AYLL006W-A 177 nt0.14□□□□□ -2.39
VPS60Q03390 YLR041WYLR041W 321 nt0.14□□□□□ -2.39
VPS60Q03390 YMR193C-AYMR193C-A 387 nt0.14□□□□□ -2.39
VPS60Q03390 YNL028WYNL028W 318 nt0.14□□□□□ -2.39
VPS60Q03390 YHR131W-AYHR131W-A 246 nt0.13□□□□□ -2.39
VPS60Q03390 YGR069WYGR069W 336 nt0.12□□□□□ -2.39
VPS60Q03390 YOR072W-BYOR072W-B 162 nt0.12□□□□□ -2.39
VPS60Q03390 BUL2YML111W 2763 nt0.12□□□□□ -2.39
VPS60Q03390 YDR366CYDR366C 399 nt0.11□□□□□ -2.39
VPS60Q03390 ATP6Q0085 780 nt0.1□□□□□ -2.39
VPS60Q03390 SNU13YEL026W 381 nt0.1□□□□□ -2.39
VPS60Q03390 YDL240C-AYDL240C-A 138 nt0.09□□□□□ -2.4
VPS60Q03390 YOR186C-AYOR186C-A 210 nt0.09□□□□□ -2.4
VPS60Q03390 YFL032WYFL032W 321 nt0.08□□□□□ -2.4
VPS60Q03390 YOR015WYOR015W 360 nt0.08□□□□□ -2.4
VPS60Q03390 COX12YLR038C 252 nt0.07□□□□□ -2.4
VPS60Q03390 YLR120W-AYLR120W-A 102 nt0.06□□□□□ -2.4
VPS60Q03390 YKU70YMR284W 1809 nt0.06□□□□□ -2.4
VPS60Q03390 YER053C-AYER053C-A 114 nt0.05□□□□□ -2.4
VPS60Q03390 YEL073CYEL073C 324 nt0.04□□□□□ -2.4
VPS60Q03390 YBR072C-AYBR072C-A 162 nt0.03□□□□□ -2.4
VPS60Q03390 MYO1YHR023W 5787 nt0.02□□□□□ -2.41
VPS60Q03390 YDR413CYDR413C 576 nt0.01□□□□□ -2.41
VPS60Q03390 RAD61YDR014W 1944 nt0.01□□□□□ -2.41
VPS60Q03390 RPL39YJL189W 156 nt0□□□□□ -2.41
VPS60Q03390 YKL118WYKL118W 312 nt0□□□□□ -2.41
VPS60Q03390 HMRA1YCR097W 381 nt-0.01□□□□□ -2.41
VPS60Q03390 snR74snR74 88 nt-0.01□□□□□ -2.41
VPS60Q03390 YER097WYER097W 330 nt-0.01□□□□□ -2.41
VPS60Q03390 YIL002W-AYIL002W-A 210 nt-0.01□□□□□ -2.41
VPS60Q03390 YMR172C-AYMR172C-A 384 nt-0.01□□□□□ -2.41
VPS60Q03390 YGL052WYGL052W 306 nt-0.02□□□□□ -2.41
VPS60Q03390 YCR038W-AYCR038W-A 126 nt-0.03□□□□□ -2.41
VPS60Q03390 YLR232WYLR232W 348 nt-0.04□□□□□ -2.42
VPS60Q03390 YMR158W-BYMR158W-B 321 nt-0.04□□□□□ -2.42
VPS60Q03390 snR45snR45 172 nt-0.04□□□□□ -2.42
VPS60Q03390 SOV1YMR066W 2697 nt-0.04□□□□□ -2.42
VPS60Q03390 GIM4YEL003W 336 nt-0.05□□□□□ -2.42
VPS60Q03390 UTP8YGR128C 2142 nt-0.07□□□□□ -2.42
VPS60Q03390 GLG1YKR058W 1851 nt-0.07□□□□□ -2.42
VPS60Q03390 YOR008C-AYOR008C-A 225 nt-0.07□□□□□ -2.42
VPS60Q03390 PRP39YML046W 1890 nt-0.08□□□□□ -2.42
VPS60Q03390 APQ12YIL040W 417 nt-0.09□□□□□ -2.42
VPS60Q03390 CSE1YGL238W 2883 nt-0.09□□□□□ -2.42
VPS60Q03390 SDH6YDR379C-A 240 nt-0.1□□□□□ -2.43
VPS60Q03390 YHR175W-AYHR175W-A 150 nt-0.11□□□□□ -2.43
VPS60Q03390 YBR099CYBR099C 384 nt-0.12□□□□□ -2.43
VPS60Q03390 YIR030W-AYIR030W-A 384 nt-0.13□□□□□ -2.43
VPS60Q03390 TAH1YCR060W 336 nt-0.14□□□□□ -2.43
VPS60Q03390 snR128snR128 126 nt-0.14□□□□□ -2.43
VPS60Q03390 YNL277W-AYNL277W-A 189 nt-0.15□□□□□ -2.43
VPS60Q03390 snR56snR56 88 nt-0.16□□□□□ -2.44
VPS60Q03390 YDR544CYDR544C 429 nt-0.16□□□□□ -2.44
VPS60Q03390 snR8snR8 190 nt-0.18□□□□□ -2.44
VPS60Q03390 tR(ACG)Q2tR(ACG)Q2 74 nt-0.19□□□□□ -2.44
VPS60Q03390 YBR182C-AYBR182C-A 195 nt-0.19□□□□□ -2.44
VPS60Q03390 EST1YLR233C 2100 nt-0.19□□□□□ -2.44
VPS60Q03390 COG6YNL041C 2520 nt-0.2□□□□□ -2.44
VPS60Q03390 tF(GAA)QtF(GAA)Q 75 nt-0.22□□□□□ -2.44
VPS60Q03390 YBL039C-AYBL039C-A 84 nt-0.22□□□□□ -2.44
VPS60Q03390 YGL041CYGL041C 204 nt-0.24□□□□□ -2.45
VPS60Q03390 TFB5YDR079C-A 219 nt-0.26□□□□□ -2.45
VPS60Q03390 YER181CYER181C 324 nt-0.27□□□□□ -2.45
VPS60Q03390 YML099W-AYML099W-A 330 nt-0.27□□□□□ -2.45
VPS60Q03390 YPR010C-AYPR010C-A 219 nt-0.27□□□□□ -2.45
VPS60Q03390 snR55snR55 98 nt-0.28□□□□□ -2.45
VPS60Q03390 YOR314W-AYOR314W-A 111 nt-0.28□□□□□ -2.45
VPS60Q03390 RPM2YML091C 3609 nt-0.3□□□□□ -2.46
VPS60Q03390 snR65snR65 100 nt-0.3□□□□□ -2.46
VPS60Q03390 YGL182CYGL182C 324 nt-0.3□□□□□ -2.46
VPS60Q03390 snR49snR49 165 nt-0.31□□□□□ -2.46
VPS60Q03390 YDR210WYDR210W 228 nt-0.32□□□□□ -2.46
VPS60Q03390 YBR131C-AYBR131C-A 90 nt-0.32□□□□□ -2.46
VPS60Q03390 SBH2YER019C-A 267 nt-0.33□□□□□ -2.46
VPS60Q03390 YEL014CYEL014C 306 nt-0.36□□□□□ -2.47
VPS60Q03390 YGR164WYGR164W 336 nt-0.36□□□□□ -2.47
VPS60Q03390 YJL182CYJL182C 318 nt-0.37□□□□□ -2.47
VPS60Q03390 YPL060C-AYPL060C-A 3315 nt-0.38□□□□□ -2.47
VPS60Q03390 YOL155W-AYOL155W-A 135 nt-0.38□□□□□ -2.47
VPS60Q03390 YPL152W-AYPL152W-A 99 nt-0.38□□□□□ -2.47
VPS60Q03390 YDR524W-CYDR524W-C 90 nt-0.39□□□□□ -2.47
VPS60Q03390 snR46snR46 197 nt-0.4□□□□□ -2.47
VPS60Q03390 YOR381W-AYOR381W-A 168 nt-0.41□□□□□ -2.48
VPS60Q03390 YJL077W-AYJL077W-A 87 nt-0.44□□□□□ -2.48
VPS60Q03390 YNL097C-BYNL097C-B 123 nt-0.45□□□□□ -2.48
VPS60Q03390 YOR170WYOR170W 306 nt-0.45□□□□□ -2.48
VPS60Q03390 tM(CAU)Q2tM(CAU)Q2 78 nt-0.47□□□□□ -2.48
Retrieved 100 of 7,029 protein–RNA pairs in 83.2 ms