Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H2P55055 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H2P55055 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.87■□□□□ 0.61
NR1H2P55055 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.87■□□□□ 0.61
NR1H2P55055 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.87■□□□□ 0.61
NR1H2P55055 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H2P55055 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.87■□□□□ 0.61
NR1H2P55055 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.87■□□□□ 0.61
NR1H2P55055 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.87■□□□□ 0.61
NR1H2P55055 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.87■□□□□ 0.61
NR1H2P55055 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.87■□□□□ 0.61
NR1H2P55055 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.87■□□□□ 0.61
NR1H2P55055 AC007613.1-201ENST00000572811 2597 ntBASIC18.87■□□□□ 0.61
NR1H2P55055 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.86■□□□□ 0.61
NR1H2P55055 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
NR1H2P55055 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.86■□□□□ 0.61
NR1H2P55055 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H2P55055 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H2P55055 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H2P55055 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H2P55055 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H2P55055 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.86■□□□□ 0.61
NR1H2P55055 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H2P55055 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.86■□□□□ 0.61
NR1H2P55055 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.86■□□□□ 0.61
NR1H2P55055 SMUG1P1-201ENST00000590640 811 ntBASIC18.86■□□□□ 0.61
NR1H2P55055 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H2P55055 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H2P55055 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NR1H2P55055 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H2P55055 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H2P55055 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H2P55055 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H2P55055 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NR1H2P55055 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H2P55055 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H2P55055 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H2P55055 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H2P55055 AC016769.1-201ENST00000409132 1010 ntBASIC18.85■□□□□ 0.61
NR1H2P55055 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.85■□□□□ 0.61
NR1H2P55055 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.85■□□□□ 0.61
NR1H2P55055 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H2P55055 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H2P55055 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H2P55055 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H2P55055 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H2P55055 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H2P55055 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H2P55055 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NR1H2P55055 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H2P55055 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H2P55055 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H2P55055 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.85■□□□□ 0.61
NR1H2P55055 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H2P55055 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H2P55055 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.84■□□□□ 0.61
NR1H2P55055 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.84■□□□□ 0.61
NR1H2P55055 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.84■□□□□ 0.61
NR1H2P55055 AC005332.8-201ENST00000622750 2735 ntBASIC18.84■□□□□ 0.61
NR1H2P55055 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
NR1H2P55055 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.84■□□□□ 0.61
NR1H2P55055 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.84■□□□□ 0.61
NR1H2P55055 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.84■□□□□ 0.61
NR1H2P55055 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.84■□□□□ 0.61
NR1H2P55055 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.84■□□□□ 0.61
NR1H2P55055 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NR1H2P55055 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NR1H2P55055 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.84■□□□□ 0.61
NR1H2P55055 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.84■□□□□ 0.61
NR1H2P55055 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.84■□□□□ 0.61
NR1H2P55055 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.84■□□□□ 0.61
NR1H2P55055 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H2P55055 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NR1H2P55055 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NR1H2P55055 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.83■□□□□ 0.61
NR1H2P55055 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NR1H2P55055 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
NR1H2P55055 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NR1H2P55055 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NR1H2P55055 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
NR1H2P55055 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NR1H2P55055 AL049812.1-201ENST00000432563 2267 ntBASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms