Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1B3P54709 TCF3P1-201ENST00000423021 1937 ntBASIC17.29■□□□□ 0.36
ATP1B3P54709 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP1B3P54709 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1B3P54709 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1B3P54709 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP1B3P54709 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ATP1B3P54709 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1B3P54709 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.29■□□□□ 0.36
ATP1B3P54709 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP1B3P54709 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP1B3P54709 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.29■□□□□ 0.36
ATP1B3P54709 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP1B3P54709 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP1B3P54709 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP1B3P54709 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1B3P54709 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1B3P54709 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1B3P54709 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1B3P54709 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1B3P54709 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1B3P54709 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1B3P54709 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP1B3P54709 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP1B3P54709 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP1B3P54709 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP1B3P54709 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP1B3P54709 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP1B3P54709 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP1B3P54709 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ATP1B3P54709 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP1B3P54709 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.28■□□□□ 0.36
ATP1B3P54709 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP1B3P54709 AC137761.2-201ENST00000561729 223 ntBASIC17.28■□□□□ 0.36
ATP1B3P54709 AC145350.3-201ENST00000569033 163 ntBASIC17.28■□□□□ 0.36
ATP1B3P54709 AL356652.1-201ENST00000615962 565 ntBASIC17.28■□□□□ 0.36
ATP1B3P54709 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP1B3P54709 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP1B3P54709 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP1B3P54709 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ATP1B3P54709 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP1B3P54709 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP1B3P54709 AC087633.2-202ENST00000565166 1439 ntBASIC17.28■□□□□ 0.36
ATP1B3P54709 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ATP1B3P54709 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP1B3P54709 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP1B3P54709 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP1B3P54709 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP1B3P54709 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP1B3P54709 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP1B3P54709 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
ATP1B3P54709 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP1B3P54709 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP1B3P54709 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP1B3P54709 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP1B3P54709 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP1B3P54709 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP1B3P54709 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP1B3P54709 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP1B3P54709 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ATP1B3P54709 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP1B3P54709 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.27■□□□□ 0.36
ATP1B3P54709 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP1B3P54709 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.27■□□□□ 0.36
ATP1B3P54709 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP1B3P54709 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP1B3P54709 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.27■□□□□ 0.36
ATP1B3P54709 AL162412.1-201ENST00000567129 965 ntBASIC17.27■□□□□ 0.36
ATP1B3P54709 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP1B3P54709 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP1B3P54709 AC013268.1-206ENST00000638368 961 ntBASIC17.27■□□□□ 0.36
ATP1B3P54709 AC112229.1-201ENST00000639295 961 ntBASIC17.27■□□□□ 0.36
ATP1B3P54709 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
ATP1B3P54709 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.27■□□□□ 0.36
ATP1B3P54709 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP1B3P54709 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATP1B3P54709 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATP1B3P54709 BX323043.1-201ENST00000641006 1765 ntBASIC17.27■□□□□ 0.35
ATP1B3P54709 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
ATP1B3P54709 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATP1B3P54709 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATP1B3P54709 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATP1B3P54709 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ATP1B3P54709 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATP1B3P54709 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATP1B3P54709 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.27■□□□□ 0.35
ATP1B3P54709 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP1B3P54709 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP1B3P54709 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP1B3P54709 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP1B3P54709 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ATP1B3P54709 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP1B3P54709 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP1B3P54709 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.26■□□□□ 0.35
ATP1B3P54709 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP1B3P54709 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP1B3P54709 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.26■□□□□ 0.35
ATP1B3P54709 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.26■□□□□ 0.35
ATP1B3P54709 AC007322.4-201ENST00000509611 723 ntBASIC17.26■□□□□ 0.35
ATP1B3P54709 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms