Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATXN3P54252 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.33■□□□□ 0.84
ATXN3P54252 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
ATXN3P54252 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATXN3P54252 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.33■□□□□ 0.84
ATXN3P54252 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.33■□□□□ 0.84
ATXN3P54252 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.32■□□□□ 0.84
ATXN3P54252 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATXN3P54252 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ATXN3P54252 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATXN3P54252 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.32■□□□□ 0.84
ATXN3P54252 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.32■□□□□ 0.84
ATXN3P54252 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.32■□□□□ 0.84
ATXN3P54252 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATXN3P54252 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.32■□□□□ 0.84
ATXN3P54252 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATXN3P54252 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATXN3P54252 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATXN3P54252 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATXN3P54252 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATXN3P54252 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.32■□□□□ 0.84
ATXN3P54252 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.32■□□□□ 0.84
ATXN3P54252 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATXN3P54252 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATXN3P54252 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATXN3P54252 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATXN3P54252 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATXN3P54252 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATXN3P54252 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATXN3P54252 FEM1AP1-201ENST00000431297 1995 ntBASIC20.32■□□□□ 0.84
ATXN3P54252 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATXN3P54252 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATXN3P54252 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.31■□□□□ 0.84
ATXN3P54252 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.31■□□□□ 0.84
ATXN3P54252 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.31■□□□□ 0.84
ATXN3P54252 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATXN3P54252 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATXN3P54252 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.31■□□□□ 0.84
ATXN3P54252 AC233702.5-201ENST00000584107 538 ntBASIC20.31■□□□□ 0.84
ATXN3P54252 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATXN3P54252 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATXN3P54252 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.31■□□□□ 0.84
ATXN3P54252 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.31■□□□□ 0.84
ATXN3P54252 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATXN3P54252 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATXN3P54252 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATXN3P54252 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
ATXN3P54252 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATXN3P54252 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATXN3P54252 RPS2P55-201ENST00000397318 883 ntBASIC20.3■□□□□ 0.84
ATXN3P54252 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ATXN3P54252 AC107956.1-201ENST00000494359 873 ntBASIC20.3■□□□□ 0.84
ATXN3P54252 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATXN3P54252 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATXN3P54252 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ATXN3P54252 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.3■□□□□ 0.84
ATXN3P54252 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.3■□□□□ 0.84
ATXN3P54252 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.3■□□□□ 0.84
ATXN3P54252 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATXN3P54252 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATXN3P54252 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATXN3P54252 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATXN3P54252 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATXN3P54252 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATXN3P54252 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.29■□□□□ 0.84
ATXN3P54252 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATXN3P54252 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATXN3P54252 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATXN3P54252 AC007952.6-201ENST00000573168 2673 ntBASIC20.29■□□□□ 0.84
ATXN3P54252 AC003957.1-201ENST00000625108 2673 ntBASIC20.29■□□□□ 0.84
ATXN3P54252 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATXN3P54252 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATXN3P54252 TSPY7P-201ENST00000431358 1114 ntBASIC20.29■□□□□ 0.84
ATXN3P54252 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATXN3P54252 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.29■□□□□ 0.84
ATXN3P54252 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.29■□□□□ 0.84
ATXN3P54252 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATXN3P54252 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ATXN3P54252 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATXN3P54252 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.29■□□□□ 0.84
ATXN3P54252 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATXN3P54252 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.29■□□□□ 0.84
ATXN3P54252 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.28■□□□□ 0.84
ATXN3P54252 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.28■□□□□ 0.84
ATXN3P54252 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3P54252 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3P54252 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3P54252 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.28■□□□□ 0.84
ATXN3P54252 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3P54252 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3P54252 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3P54252 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3P54252 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3P54252 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3P54252 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
ATXN3P54252 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ATXN3P54252 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3P54252 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3P54252 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3P54252 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms