Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMSP52788 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMSP52788 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMSP52788 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.67■□□□□ 0.58
SMSP52788 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMSP52788 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.67■□□□□ 0.58
SMSP52788 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMSP52788 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMSP52788 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMSP52788 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.67■□□□□ 0.58
SMSP52788 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.67■□□□□ 0.58
SMSP52788 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SMSP52788 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.67■□□□□ 0.58
SMSP52788 AC098590.1-201ENST00000468126 897 ntBASIC18.67■□□□□ 0.58
SMSP52788 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMSP52788 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.67■□□□□ 0.58
SMSP52788 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.67■□□□□ 0.58
SMSP52788 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.67■□□□□ 0.58
SMSP52788 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.67■□□□□ 0.58
SMSP52788 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMSP52788 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SMSP52788 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMSP52788 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMSP52788 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.67■□□□□ 0.58
SMSP52788 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMSP52788 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMSP52788 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMSP52788 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.66■□□□□ 0.58
SMSP52788 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMSP52788 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMSP52788 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMSP52788 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMSP52788 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
SMSP52788 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMSP52788 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMSP52788 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMSP52788 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMSP52788 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMSP52788 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SMSP52788 LSM12P1-201ENST00000411836 588 ntBASIC18.66■□□□□ 0.58
SMSP52788 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.66■□□□□ 0.58
SMSP52788 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMSP52788 AC128676.1-201ENST00000454392 318 ntBASIC18.66■□□□□ 0.58
SMSP52788 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.66■□□□□ 0.58
SMSP52788 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.66■□□□□ 0.58
SMSP52788 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMSP52788 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
SMSP52788 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SMSP52788 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMSP52788 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMSP52788 RBM17P2-201ENST00000616397 1405 ntBASIC18.66■□□□□ 0.58
SMSP52788 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMSP52788 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMSP52788 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SMSP52788 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.65■□□□□ 0.58
SMSP52788 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMSP52788 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMSP52788 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMSP52788 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.65■□□□□ 0.58
SMSP52788 RPS2P4-201ENST00000476944 856 ntBASIC18.65■□□□□ 0.58
SMSP52788 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMSP52788 AC243732.1-201ENST00000612648 864 ntBASIC18.65■□□□□ 0.58
SMSP52788 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.65■□□□□ 0.58
SMSP52788 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.65■□□□□ 0.58
SMSP52788 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMSP52788 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.65■□□□□ 0.58
SMSP52788 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMSP52788 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SMSP52788 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SMSP52788 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
SMSP52788 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMSP52788 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMSP52788 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.64■□□□□ 0.57
SMSP52788 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.64■□□□□ 0.57
SMSP52788 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.64■□□□□ 0.57
SMSP52788 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMSP52788 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.64■□□□□ 0.57
SMSP52788 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SMSP52788 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.64■□□□□ 0.57
SMSP52788 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.64■□□□□ 0.57
SMSP52788 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.64■□□□□ 0.57
SMSP52788 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMSP52788 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SMSP52788 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMSP52788 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.64■□□□□ 0.57
SMSP52788 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMSP52788 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.64■□□□□ 0.57
SMSP52788 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMSP52788 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.64■□□□□ 0.57
SMSP52788 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMSP52788 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SMSP52788 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMSP52788 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMSP52788 AC092720.2-201ENST00000602388 1665 ntBASIC18.63■□□□□ 0.57
SMSP52788 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMSP52788 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SMSP52788 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.63■□□□□ 0.57
SMSP52788 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMSP52788 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SMSP52788 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms