Protein–RNA interactions for Protein: P52593

NUP188, Nucleoporin NUP188, yeastyeast

Known RBP Predictions only

Length 1,655 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP188P52593 YHR007C-AYHR007C-A 216 nt-2.95□□□□□ -2.88
NUP188P52593 YKL083WYKL083W 615 nt-2.95□□□□□ -2.88
NUP188P52593 YER090C-AYER090C-A 90 nt-2.97□□□□□ -2.88
NUP188P52593 BUD26YDR241W 288 nt-2.98□□□□□ -2.89
NUP188P52593 YNL146C-AYNL146C-A 195 nt-2.98□□□□□ -2.89
NUP188P52593 YLR456WYLR456W 615 nt-2.98□□□□□ -2.89
NUP188P52593 YNL303WYNL303W 348 nt-2.98□□□□□ -2.89
NUP188P52593 snR39BsnR39B 96 nt-3.01□□□□□ -2.89
NUP188P52593 BI2Q0110 1272 nt-3.02□□□□□ -2.89
NUP188P52593 YFL012WYFL012W 447 nt-3.02□□□□□ -2.89
NUP188P52593 tQ(UUG)QtQ(UUG)Q 76 nt-3.05□□□□□ -2.9
NUP188P52593 MRPL32YCR003W 552 nt-3.08□□□□□ -2.9
NUP188P52593 YLR202CYLR202C 327 nt-3.08□□□□□ -2.9
NUP188P52593 YAF9YNL107W 681 nt-3.08□□□□□ -2.9
NUP188P52593 YDR220CYDR220C 294 nt-3.08□□□□□ -2.9
NUP188P52593 YHR050W-AYHR050W-A 171 nt-3.08□□□□□ -2.9
NUP188P52593 YMR193C-AYMR193C-A 387 nt-3.08□□□□□ -2.9
NUP188P52593 YPR002C-AYPR002C-A 198 nt-3.09□□□□□ -2.9
NUP188P52593 YMR013C-AYMR013C-A 150 nt-3.1□□□□□ -2.91
NUP188P52593 YPR039WYPR039W 336 nt-3.1□□□□□ -2.91
NUP188P52593 PRM3YPL192C 402 nt-3.11□□□□□ -2.91
NUP188P52593 YEL020C-BYEL020C-B 198 nt-3.11□□□□□ -2.91
NUP188P52593 YNL266WYNL266W 420 nt-3.14□□□□□ -2.91
NUP188P52593 YGR270C-AYGR270C-A 219 nt-3.15□□□□□ -2.91
NUP188P52593 YMR315W-AYMR315W-A 108 nt-3.15□□□□□ -2.91
NUP188P52593 RPS30AYLR287C-A 192 nt-3.16□□□□□ -2.92
NUP188P52593 YML054C-AYML054C-A 159 nt-3.16□□□□□ -2.92
NUP188P52593 YDR426CYDR426C 378 nt-3.18□□□□□ -2.92
NUP188P52593 GPI15YNL038W 690 nt-3.2□□□□□ -2.92
NUP188P52593 YDL011CYDL011C 324 nt-3.2□□□□□ -2.92
NUP188P52593 RPS27BYHR021C 249 nt-3.24□□□□□ -2.93
NUP188P52593 TOM22YNL131W 459 nt-3.25□□□□□ -2.93
NUP188P52593 YDR048CYDR048C 315 nt-3.26□□□□□ -2.93
NUP188P52593 POP6YGR030C 477 nt-3.27□□□□□ -2.93
NUP188P52593 YMR172C-AYMR172C-A 384 nt-3.28□□□□□ -2.93
NUP188P52593 YOR309CYOR309C 381 nt-3.29□□□□□ -2.94
NUP188P52593 snR50snR50 90 nt-3.3□□□□□ -2.94
NUP188P52593 YIR021W-AYIR021W-A 213 nt-3.33□□□□□ -2.94
NUP188P52593 YDR544CYDR544C 429 nt-3.35□□□□□ -2.95
NUP188P52593 YLR269CYLR269C 351 nt-3.36□□□□□ -2.95
NUP188P52593 YGR069WYGR069W 336 nt-3.39□□□□□ -2.95
NUP188P52593 YOR314W-AYOR314W-A 111 nt-3.41□□□□□ -2.96
NUP188P52593 YLR163W-AYLR163W-A 114 nt-3.43□□□□□ -2.96
NUP188P52593 IRC13YOR235W 315 nt-3.43□□□□□ -2.96
NUP188P52593 TSC3YBR058C-A 243 nt-3.45□□□□□ -2.96
NUP188P52593 YJR162CYJR162C 351 nt-3.46□□□□□ -2.96
NUP188P52593 YNL337WYNL337W 255 nt-3.46□□□□□ -2.96
NUP188P52593 snR67snR67 82 nt-3.49□□□□□ -2.97
NUP188P52593 YOL083C-AYOL083C-A 141 nt-3.5□□□□□ -2.97
NUP188P52593 YBL071CYBL071C 309 nt-3.53□□□□□ -2.97
NUP188P52593 snR69snR69 101 nt-3.54□□□□□ -2.98
NUP188P52593 YGL149WYGL149W 306 nt-3.6□□□□□ -2.99
NUP188P52593 YLL019W-AYLL019W-A 93 nt-3.61□□□□□ -2.99
NUP188P52593 YLR342W-AYLR342W-A 174 nt-3.61□□□□□ -2.99
NUP188P52593 YOR008C-AYOR008C-A 225 nt-3.62□□□□□ -2.99
NUP188P52593 snR57snR57 88 nt-3.62□□□□□ -2.99
NUP188P52593 YML099W-AYML099W-A 330 nt-3.62□□□□□ -2.99
NUP188P52593 ATP19YOL077W-A 207 nt-3.62□□□□□ -2.99
NUP188P52593 PCC1YKR095W-A 267 nt-3.63□□□□□ -2.99
NUP188P52593 YLR217WYLR217W 324 nt-3.64□□□□□ -2.99
NUP188P52593 YDR102CYDR102C 333 nt-3.66□□□□□ -3
NUP188P52593 snR9snR9 187 nt-3.67□□□□□ -3
NUP188P52593 YDR524W-CYDR524W-C 90 nt-3.67□□□□□ -3
NUP188P52593 YBR182C-AYBR182C-A 195 nt-3.68□□□□□ -3
NUP188P52593 YER175W-AYER175W-A 165 nt-3.68□□□□□ -3
NUP188P52593 YER137W-AYER137W-A 306 nt-3.74□□□□□ -3.01
NUP188P52593 YIL029CYIL029C 429 nt-3.74□□□□□ -3.01
NUP188P52593 HMRA1YCR097W 381 nt-3.76□□□□□ -3.01
NUP188P52593 YGR174W-AYGR174W-A 87 nt-3.78□□□□□ -3.01
NUP188P52593 YJL197C-AYJL197C-A 282 nt-3.78□□□□□ -3.01
NUP188P52593 AI5_BETAQ0075 1065 nt-3.79□□□□□ -3.02
NUP188P52593 YOR376W-AYOR376W-A 156 nt-3.83□□□□□ -3.02
NUP188P52593 YDL158CYDL158C 309 nt-3.84□□□□□ -3.02
NUP188P52593 YER097WYER097W 330 nt-3.89□□□□□ -3.03
NUP188P52593 tD(GUC)QtD(GUC)Q 75 nt-3.9□□□□□ -3.03
NUP188P52593 ATG16YMR159C 453 nt-3.9□□□□□ -3.03
NUP188P52593 YIL115W-AYIL115W-A 372 nt-3.95□□□□□ -3.04
NUP188P52593 YDL016CYDL016C 303 nt-3.97□□□□□ -3.04
NUP188P52593 YPR197CYPR197C 564 nt-3.97□□□□□ -3.05
NUP188P52593 YLR286W-AYLR286W-A 135 nt-3.99□□□□□ -3.05
NUP188P52593 YBR196C-AYBR196C-A 150 nt-4□□□□□ -3.05
NUP188P52593 YAR047CYAR047C 321 nt-4.01□□□□□ -3.05
NUP188P52593 YOR316C-AYOR316C-A 210 nt-4.03□□□□□ -3.05
NUP188P52593 YOR072W-BYOR072W-B 162 nt-4.03□□□□□ -3.06
NUP188P52593 YGR146C-AYGR146C-A 162 nt-4.06□□□□□ -3.06
NUP188P52593 YDL159C-BYDL159C-B 177 nt-4.1□□□□□ -3.07
NUP188P52593 YFL019CYFL019C 354 nt-4.16□□□□□ -3.08
NUP188P52593 YER181CYER181C 324 nt-4.18□□□□□ -3.08
NUP188P52593 YFL032WYFL032W 321 nt-4.2□□□□□ -3.08
NUP188P52593 MPC1YGL080W 393 nt-4.22□□□□□ -3.09
NUP188P52593 snR55snR55 98 nt-4.23□□□□□ -3.09
NUP188P52593 YJR157WYJR157W 363 nt-4.26□□□□□ -3.09
NUP188P52593 YOL013W-BYOL013W-B 291 nt-4.28□□□□□ -3.09
NUP188P52593 CSN9YDR179C 489 nt-4.29□□□□□ -3.1
NUP188P52593 snR6snR6 112 nt-4.31□□□□□ -3.1
NUP188P52593 tM(CAU)Q2tM(CAU)Q2 78 nt-4.31□□□□□ -3.1
NUP188P52593 YHR180C-BYHR180C-B 105 nt-4.31□□□□□ -3.1
NUP188P52593 YDR524C-AYDR524C-A 120 nt-4.32□□□□□ -3.1
NUP188P52593 snR41snR41 95 nt-4.32□□□□□ -3.1
NUP188P52593 YBR178WYBR178W 375 nt-4.33□□□□□ -3.1
Retrieved 100 of 7,029 protein–RNA pairs in 107 ms