Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 YEL014CYEL014C 306 nt0.77□□□□□ -2.29
SSN8P47821 BLI1YKL061W 342 nt0.77□□□□□ -2.29
SSN8P47821 YLR041WYLR041W 321 nt0.77□□□□□ -2.29
SSN8P47821 FYV10YIL097W 1551 nt0.77□□□□□ -2.29
SSN8P47821 SEC8YPR055W 3198 nt0.77□□□□□ -2.29
SSN8P47821 PAU24YBR301W 363 nt0.76□□□□□ -2.29
SSN8P47821 YML002WYML002W 2214 nt0.75□□□□□ -2.29
SSN8P47821 LTE1YAL024C 4308 nt0.75□□□□□ -2.29
SSN8P47821 YJL182CYJL182C 318 nt0.74□□□□□ -2.29
SSN8P47821 UBP3YER151C 2739 nt0.73□□□□□ -2.29
SSN8P47821 PRP39YML046W 1890 nt0.72□□□□□ -2.29
SSN8P47821 OST4YDL232W 111 nt0.72□□□□□ -2.29
SSN8P47821 YLR399W-AYLR399W-A 105 nt0.72□□□□□ -2.29
SSN8P47821 snR46snR46 197 nt0.71□□□□□ -2.3
SSN8P47821 SEC1YDR164C 2175 nt0.7□□□□□ -2.3
SSN8P47821 YOR192C-BYOR192C-B 5313 nt0.69□□□□□ -2.3
SSN8P47821 PRP42YDR235W 1635 nt0.68□□□□□ -2.3
SSN8P47821 YKL100W-AYKL100W-A 90 nt0.68□□□□□ -2.3
SSN8P47821 snR52snR52 92 nt0.68□□□□□ -2.3
SSN8P47821 YMR046W-AYMR046W-A 129 nt0.67□□□□□ -2.3
SSN8P47821 YPR159C-AYPR159C-A 102 nt0.67□□□□□ -2.3
SSN8P47821 YJL150WYJL150W 303 nt0.66□□□□□ -2.3
SSN8P47821 YHR131W-AYHR131W-A 246 nt0.65□□□□□ -2.31
SSN8P47821 YJL127W-AYJL127W-A 117 nt0.65□□□□□ -2.31
SSN8P47821 YMR272W-AYMR272W-A 114 nt0.65□□□□□ -2.31
SSN8P47821 TAH1YCR060W 336 nt0.64□□□□□ -2.31
SSN8P47821 YDR406W-AYDR406W-A 246 nt0.64□□□□□ -2.31
SSN8P47821 SNU13YEL026W 381 nt0.63□□□□□ -2.31
SSN8P47821 YBL039C-AYBL039C-A 84 nt0.63□□□□□ -2.31
SSN8P47821 TRS65YGR166W 1683 nt0.62□□□□□ -2.31
SSN8P47821 tM(CAU)Q1tM(CAU)Q1 76 nt0.62□□□□□ -2.31
SSN8P47821 UTP8YGR128C 2142 nt0.61□□□□□ -2.31
SSN8P47821 UTP10YJL109C 5310 nt0.6□□□□□ -2.31
SSN8P47821 YDR544CYDR544C 429 nt0.6□□□□□ -2.31
SSN8P47821 YIL142C-AYIL142C-A 333 nt0.6□□□□□ -2.31
SSN8P47821 YGL182CYGL182C 324 nt0.59□□□□□ -2.31
SSN8P47821 PAU12YGR294W 363 nt0.59□□□□□ -2.31
SSN8P47821 YLR232WYLR232W 348 nt0.59□□□□□ -2.31
SSN8P47821 YNL198CYNL198C 303 nt0.59□□□□□ -2.31
SSN8P47821 tT(AGU)BtT(AGU)B 73 nt0.57□□□□□ -2.32
SSN8P47821 tT(AGU)CtT(AGU)C 73 nt0.57□□□□□ -2.32
SSN8P47821 tT(AGU)DtT(AGU)D 73 nt0.57□□□□□ -2.32
SSN8P47821 tT(AGU)HtT(AGU)H 73 nt0.57□□□□□ -2.32
SSN8P47821 tT(AGU)I1tT(AGU)I1 73 nt0.57□□□□□ -2.32
SSN8P47821 tT(AGU)I2tT(AGU)I2 73 nt0.57□□□□□ -2.32
SSN8P47821 tT(AGU)JtT(AGU)J 73 nt0.57□□□□□ -2.32
SSN8P47821 tT(AGU)N1tT(AGU)N1 73 nt0.57□□□□□ -2.32
SSN8P47821 tT(AGU)N2tT(AGU)N2 73 nt0.57□□□□□ -2.32
SSN8P47821 tT(AGU)O1tT(AGU)O1 73 nt0.57□□□□□ -2.32
SSN8P47821 tT(AGU)O2tT(AGU)O2 73 nt0.57□□□□□ -2.32
SSN8P47821 YOR381W-AYOR381W-A 168 nt0.56□□□□□ -2.32
SSN8P47821 NNF2YGR089W 2811 nt0.56□□□□□ -2.32
SSN8P47821 BUL2YML111W 2763 nt0.56□□□□□ -2.32
SSN8P47821 YEL073CYEL073C 324 nt0.55□□□□□ -2.32
SSN8P47821 YSP1YHR155W 3687 nt0.55□□□□□ -2.32
SSN8P47821 PET111YMR257C 2403 nt0.54□□□□□ -2.32
SSN8P47821 BEM3YPL115C 3387 nt0.54□□□□□ -2.32
SSN8P47821 YDR371C-AYDR371C-A 105 nt0.54□□□□□ -2.32
SSN8P47821 YLR342W-AYLR342W-A 174 nt0.54□□□□□ -2.32
SSN8P47821 ORC3YLL004W 1851 nt0.54□□□□□ -2.32
SSN8P47821 RPS26AYGL189C 360 nt0.53□□□□□ -2.32
SSN8P47821 YLL006W-AYLL006W-A 177 nt0.53□□□□□ -2.32
SSN8P47821 SDH6YDR379C-A 240 nt0.51□□□□□ -2.33
SSN8P47821 NIP1YMR309C 2439 nt0.51□□□□□ -2.33
SSN8P47821 YBR072C-AYBR072C-A 162 nt0.51□□□□□ -2.33
SSN8P47821 SBH1YER087C-B 249 nt0.5□□□□□ -2.33
SSN8P47821 YLR466C-BYLR466C-B 117 nt0.5□□□□□ -2.33
SSN8P47821 YBL053WYBL053W 375 nt0.5□□□□□ -2.33
SSN8P47821 COG6YNL041C 2520 nt0.48□□□□□ -2.33
SSN8P47821 YMR160WYMR160W 2451 nt0.47□□□□□ -2.33
SSN8P47821 YOR170WYOR170W 306 nt0.47□□□□□ -2.33
SSN8P47821 STF2YGR008C 255 nt0.46□□□□□ -2.34
SSN8P47821 YOR314W-AYOR314W-A 111 nt0.46□□□□□ -2.34
SSN8P47821 snR39BsnR39B 96 nt0.45□□□□□ -2.34
SSN8P47821 IQG1YPL242C 4488 nt0.44□□□□□ -2.34
SSN8P47821 tL(UAA)QtL(UAA)Q 85 nt0.44□□□□□ -2.34
SSN8P47821 YNL337WYNL337W 255 nt0.44□□□□□ -2.34
SSN8P47821 YOR329W-AYOR329W-A 210 nt0.44□□□□□ -2.34
SSN8P47821 ULP2YIL031W 3105 nt0.43□□□□□ -2.34
SSN8P47821 snR48snR48 113 nt0.43□□□□□ -2.34
SSN8P47821 MLP1YKR095W 5628 nt0.42□□□□□ -2.34
SSN8P47821 YGR151CYGR151C 336 nt0.42□□□□□ -2.34
SSN8P47821 RCO1YMR075W 2055 nt0.42□□□□□ -2.34
SSN8P47821 GLG1YKR058W 1851 nt0.41□□□□□ -2.34
SSN8P47821 YDR210WYDR210W 228 nt0.41□□□□□ -2.34
SSN8P47821 HUG1YML058W-A 207 nt0.41□□□□□ -2.34
SSN8P47821 YBL100W-BYBL100W-B 5313 nt0.39□□□□□ -2.35
SSN8P47821 YNL054W-BYNL054W-B 5250 nt0.39□□□□□ -2.35
SSN8P47821 YNL338WYNL338W 159 nt0.39□□□□□ -2.35
SSN8P47821 FMP27YLR454W 7887 nt0.39□□□□□ -2.35
SSN8P47821 YOR102WYOR102W 351 nt0.38□□□□□ -2.35
SSN8P47821 QCR9YGR183C 201 nt0.37□□□□□ -2.35
SSN8P47821 YGL007C-AYGL007C-A 87 nt0.36□□□□□ -2.35
SSN8P47821 YHL015W-AYHL015W-A 84 nt0.36□□□□□ -2.35
SSN8P47821 YPL060C-AYPL060C-A 3315 nt0.36□□□□□ -2.35
SSN8P47821 MLP2YIL149C 5040 nt0.36□□□□□ -2.35
SSN8P47821 UTP20YBL004W 7482 nt0.35□□□□□ -2.35
SSN8P47821 ESP1YGR098C 4893 nt0.35□□□□□ -2.35
SSN8P47821 CSE1YGL238W 2883 nt0.35□□□□□ -2.35
SSN8P47821 YDL007C-AYDL007C-A 258 nt0.34□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 56.7 ms